RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-217	ENST00000492883	SLC35A4	Q96G79	324 aa		12.83	□□□□□ -0.36
CCM2-217	ENST00000492883	CCDC115	Q96NT0	180 aa		12.83	□□□□□ -0.36
CCM2-217	ENST00000492883	PANX1	Q96RD7	426 aa		12.83	□□□□□ -0.36
CCM2-217	ENST00000492883	NODAL	Q96S42	347 aa		12.83	□□□□□ -0.36
CCM2-217	ENST00000492883	SLX1A	Q9BQ83	275 aa		12.83	□□□□□ -0.36
CCM2-217	ENST00000492883	TMEM120A	Q9BXJ8	343 aa		12.83	□□□□□ -0.36
CCM2-217	ENST00000492883	ACTRT3	Q9BYD9	372 aa		12.83	□□□□□ -0.36
CCM2-217	ENST00000492883	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	12.83	□□□□□ -0.36
CCM2-217	ENST00000492883	RMND5A	Q9H871	391 aa		12.83	□□□□□ -0.36
CCM2-217	ENST00000492883	TUBA8	Q9NY65	449 aa	Predicted RBP	12.83	□□□□□ -0.36
CCM2-217	ENST00000492883	SEC14L3	Q9UDX4	400 aa		12.83	□□□□□ -0.36
CCM2-217	ENST00000492883	BOK	Q9UMX3	212 aa	Predicted RBP	12.83	□□□□□ -0.36
CCM2-217	ENST00000492883	IGSF10	Q6WRI0	2623 aa		12.83	□□□□□ -0.36
CCM2-217	ENST00000492883	DOCK10	Q96BY6	2186 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	RNF103-CHMP3	A0A140T963	221 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	GXYLT2	A0PJZ3	443 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	FAM234B	A2RU67	622 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	ANKUB1	A6NFN9	424 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	SOX30	O94993	753 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	SNX4	O95219	450 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	WISP1	O95388	367 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	CBX6	O95503	412 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	ACP2	P11117	423 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	MATN1	P21941	496 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	GNLY	P22749	145 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	CHI3L1	P36222	383 aa	Predicted RBP	12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	MASP1	P48740	699 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	ARFIP2	P53365	341 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	KCNK10	P57789	538 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	IRX1	P78414	480 aa	Predicted RBP	12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	MRPL49	Q13405	166 aa	Known RBP	12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	SQLE	Q14534	574 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	DUSP5	Q16690	384 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	KRTCAP3	Q53RY4	240 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	RNFT1	Q5M7Z0	435 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	BICRAL	Q6AI39	1079 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	CDC73	Q6P1J9	531 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	GFRAL	Q6UXV0	394 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	PACS2	Q86VP3	889 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	SLC22A16	Q86VW1	577 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	TRIML2	Q8N7C3	387 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	COX18	Q8N8Q8	333 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	ST6GALNAC3	Q8NDV1	305 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	HOXB13	Q92826	284 aa	Predicted RBP	12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	STAC	Q99469	402 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	INPP5K	Q9BT40	448 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	ANGPTL4	Q9BY76	406 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	TTTY12	Q9BZ98	90 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	RABEP2	Q9H5N1	569 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	IL1RL2	Q9HB29	575 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	PROK2	Q9HC23	129 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	GPATCH2	Q9NW75	528 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	KLRF1	Q9NZS2	232 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	PCDHGB3	Q9Y5G1	929 aa		12.82	□□□□□ -0.36
CCM2-217	ENST00000492883	CCDC154	A6NI56	674 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	FAM166B	A8MTA8	275 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	RFXANK	O14593	260 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	ASNA1	O43681	348 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	UNC5C	O95185	931 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	ANP32D	O95626	131 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	IL33	O95760	270 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	GSN	P06396	782 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	MAP3K8	P41279	467 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	MRPL19	P49406	292 aa	Known RBP	12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	ATP4B	P51164	291 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	POU6F2	P78424	691 aa	Predicted RBP	12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	KCNC4	Q03721	635 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	TIGD2	Q4W5G0	525 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	AGK	Q53H12	422 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	METTL21C	Q5VZV1	264 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	SLC30A6	Q6NXT4	461 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	ANGPTL8	Q6UXH0	198 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	GOT1L1	Q8NHS2	421 aa	Predicted RBP	12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	VPS33A	Q96AX1	596 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	ITCH	Q96J02	903 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	ZNF597	Q96LX8	424 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	GPR137	Q96N19	417 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	SLC35A5	Q9BS91	424 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	BTBD2	Q9BX70	525 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	OSBPL11	Q9BXB4	747 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	DEFB127	Q9H1M4	99 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	PIGU	Q9H490	435 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	ZFP64	Q9NPA5	681 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	GIN1	Q9NXP7	522 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	CCDC167	Q9P0B6	97 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	PIEZO2	Q9H5I5	2752 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	ATRX	P46100	2492 aa		12.81	□□□□□ -0.36
CCM2-217	ENST00000492883	C2orf72	A6NCS6	295 aa		12.8	□□□□□ -0.36
CCM2-217	ENST00000492883	PRAMEF25	A6NGN4	478 aa		12.8	□□□□□ -0.36
CCM2-217	ENST00000492883	DUXA	A6NLW8	204 aa		12.8	□□□□□ -0.36
CCM2-217	ENST00000492883	NR5A2	O00482	541 aa		12.8	□□□□□ -0.36
CCM2-217	ENST00000492883	CDC40	O60508	579 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
CCM2-217	ENST00000492883	ICOSLG	O75144	302 aa		12.8	□□□□□ -0.36
CCM2-217	ENST00000492883	WISP2	O76076	250 aa		12.8	□□□□□ -0.36
CCM2-217	ENST00000492883	PDE9A	O76083	593 aa		12.8	□□□□□ -0.36
CCM2-217	ENST00000492883	KCNK2	O95069	426 aa		12.8	□□□□□ -0.36
CCM2-217	ENST00000492883	CYP4B1	P13584	511 aa		12.8	□□□□□ -0.36
CCM2-217	ENST00000492883	ZFP36L2	P47974	494 aa	Known RBP	12.8	□□□□□ -0.36
CCM2-217	ENST00000492883	UQCRFS1	P47985	274 aa		12.8	□□□□□ -0.36
CCM2-217	ENST00000492883	CLK3	P49761	638 aa	Known RBP	12.8	□□□□□ -0.36

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