RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 C2orf54Q08AI8 447 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 LRRC74AQ0VAA2 488 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 PLCXD2Q0VAA5 305 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 TRAF3Q13114 568 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 KEAP1Q14145 624 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 EFR3AQ14156 821 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 CEBPEQ15744 281 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 EIPR1Q53HC9 387 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 WIPI1Q5MNZ9 446 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-212ENST00000492407 BICRALQ6AI39 1079 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 ANGPTL8Q6UXH0 198 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 TMEM64Q6YI46 380 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 COMMD6Q7Z4G1 85 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 PLCZ1Q86YW0 608 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 DOK4Q8TEW6 326 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 UCN3Q969E3 161 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 TM4SF18Q96CE8 201 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 OMA1Q96E52 524 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 ZNF681Q96N22 645 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 COL21A1Q96P44 957 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 BTBD9Q96Q07 612 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 PIP5K1AQ99755 562 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 MRPL57Q9BQC6 102 aaKnown RBP8.31□□□□□ -1.08
HDAC3-212ENST00000492407 UQCC2Q9BRT2 126 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 YIPF4Q9BSR8 244 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 MRPL1Q9BYD6 325 aaKnown RBP8.31□□□□□ -1.08
HDAC3-212ENST00000492407 VPS11Q9H270 941 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 EPB41L4BQ9H329 900 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 LIME1Q9H400 295 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 ZBTB26Q9HCK0 441 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 NEUROD4Q9HD90 331 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 ZDHHC18Q9NUE0 388 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 NDRG3Q9UGV2 375 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 DMGDHQ9UI17 866 aaKnown RBP8.31□□□□□ -1.08
HDAC3-212ENST00000492407 ZNF180Q9UJW8 692 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 PAIP2BQ9ULR5 123 aaKnown RBP8.31□□□□□ -1.08
HDAC3-212ENST00000492407 PLEKHA6Q9Y2H5 1048 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 GPR55Q9Y2T6 319 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-212ENST00000492407 SNX5Q9Y5X3 404 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 ZNF780BQ9Y6R6 833 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 DNAJC13O75165 2243 aa8.31□□□□□ -1.08
HDAC3-212ENST00000492407 MAP1AP78559 2803 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-212ENST00000492407 A0A1W2PS29 197 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 PRAMEF25A6NGN4 478 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 FAM171A2A8MVW0 826 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 LINC01387J3KSC0 135 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 GNB5O14775 395 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 CASKO14936 926 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 SLITRK5O94991 958 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 LRATO95237 230 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 CBX7O95931 251 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 HRGP04196 525 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 RPS17P08708 135 aaKnown RBP8.3□□□□□ -1.08
HDAC3-212ENST00000492407 HOXC12P31275 282 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 ARL1P40616 181 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-212ENST00000492407 PTGDSP41222 190 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 EMDP50402 254 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 PNLIPRP2P54317 469 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 EEFSECP57772 596 aaKnown RBP8.3□□□□□ -1.08
HDAC3-212ENST00000492407 ETF1P62495 437 aaKnown RBP8.3□□□□□ -1.08
HDAC3-212ENST00000492407 HMGCS1Q01581 520 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 GALNT1Q10472 559 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-212ENST00000492407 CSTF3Q12996 717 aaKnown RBP8.3□□□□□ -1.08
HDAC3-212ENST00000492407 FGFBP1Q14512 234 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 SHEQ5VZ18 495 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 FBXW10Q5XX13 1052 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 OR2A2Q6IF42 318 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 USP51Q70EK9 711 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 YRDCQ86U90 279 aaKnown RBP8.3□□□□□ -1.08
HDAC3-212ENST00000492407 WDSUB1Q8N9V3 476 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 SPERTQ8NA61 448 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 C9orf106Q8NAJ2 232 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 OR4F6Q8NGB9 312 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 OR14L1PQ8NHC6 308 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 EPS8L3Q8TE67 593 aaKnown RBP8.3□□□□□ -1.08
HDAC3-212ENST00000492407 RNF138Q8WVD3 245 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 SLC44A1Q8WWI5 657 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 PHF21BQ96EK2 531 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 NRBF2Q96F24 287 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 CDK15Q96Q40 435 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 NODALQ96S42 347 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 TUBA1CQ9BQE3 449 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 RBM24Q9BX46 236 aaKnown RBP8.3□□□□□ -1.08
HDAC3-212ENST00000492407 ITPAQ9BY32 194 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 STMN4Q9H169 189 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-212ENST00000492407 HHATLQ9HCP6 504 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 SIRT5Q9NXA8 310 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 KLRF1Q9NZS2 232 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 VPS29Q9UBQ0 182 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 TRPS1Q9UHF7 1281 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 BCAP29Q9UHQ4 241 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 SLC12A4Q9UP95 1085 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 DTX4Q9Y2E6 619 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 DLGAP4Q9Y2H0 992 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 STK38LQ9Y2H1 464 aa8.3□□□□□ -1.08
HDAC3-212ENST00000492407 SERTM1A2A2V5 107 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 CCDC151A5D8V7 595 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 A8MXE2 369 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 KDM4EB2RXH2 506 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-212ENST00000492407 EEF1E1-BLOC1S5C9J1V9 151 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms