RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 STARP49675 285 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 CORO7P57737 925 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 TRA2BP62995 288 aaKnown RBP6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 TLE4Q04727 773 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 SLC18A2Q05940 514 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 CRYZQ08257 329 aaKnown RBP6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 CSTF3Q12996 717 aaKnown RBP6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 CT45A2Q5DJT8 189 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 SPDYAQ5MJ70 313 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 C1orf185Q5T7R7 199 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 WLSQ5T9L3 541 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 CLEC6AQ6EIG7 209 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 OR5M10Q6IEU7 315 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 FAM71E1Q6IPT2 247 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 ANKRD26P1Q6NSI1 321 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 POMZP3Q6PJE2 187 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 B3GNT6Q6ZMB0 384 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 Q6ZSR9 355 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 GDF7Q7Z4P5 450 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 SLC22A9Q8IVM8 553 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 C10orf107Q8IVU9 208 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 ULK2Q8IYT8 1036 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 WDSUB1Q8N9V3 476 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 C7orf57Q8NEG2 295 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 TNIP2Q8NFZ5 429 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 OR7G2Q8NG99 324 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 OR7G1Q8NGA0 311 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 CDC26Q8NHZ8 85 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 NEIL3Q8TAT5 605 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 ASB5Q8WWX0 329 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 NRGNQ92686 78 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 TMBIM1Q969X1 311 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 WDYHV1Q96HA8 205 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 LCORQ96JN0 433 aaPredicted RBP6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 TIMP4Q99727 224 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 TREX2Q9BQ50 279 aaPredicted RBP6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 GATA5Q9BWX5 397 aaPredicted RBP6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 TMPRSS13Q9BYE2 586 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 KRTAP4-9Q9BYQ8 210 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 RTN4RQ9BZR6 473 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 UBQLN3Q9H347 655 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 ACKR4Q9NPB9 350 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 PFDN4Q9NQP4 134 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 COQ3Q9NZJ6 369 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 GIMAP2Q9UG22 337 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 BOKQ9UMX3 212 aaPredicted RBP6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 GPR55Q9Y2T6 319 aaPredicted RBP6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 FIS1Q9Y3D6 152 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 MPDZO75970 2070 aa6.67□□□□□ -1.34
PRPF4B-208ENST00000490653 MED13LQ71F56 2210 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 SPG11Q96JI7 2443 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 C15orf38-AP3S2A0A0A6YYH1 394 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 GNG14A0A1W2PPG7 69 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 OR14I1A6ND48 311 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 MYO1GB0I1T2 1018 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 TP53I11O14683 189 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 TSPAN2O60636 221 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 GLRA3O75311 464 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 GUCY1B2O75343 617 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 SPAG7O75391 227 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 REM1O75628 298 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 JUNP05412 331 aaKnown RBP6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 HPNP05981 417 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 ANXA4P09525 319 aaPredicted RBP6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 HSD3B1P14060 373 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 CPA3P15088 417 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 IGFBP2P18065 325 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 KRT15P19012 456 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 DRD5P21918 477 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 HSD3B2P26439 372 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 PTPN6P29350 595 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 CHRNB4P30926 498 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 ARRB2P32121 409 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 CRHR1P34998 444 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 PPICP45877 212 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 ZFP36L2P47974 494 aaKnown RBP6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 CDK9P50750 372 aaKnown RBP6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 PKNOX1P55347 436 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 DNAJB13P59910 316 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 ACSM2AQ08AH3 577 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 LCP2Q13094 533 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 KIAA0040Q15053 153 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 RPS6KA2Q15349 733 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 TOMM20Q15388 145 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 CEBPEQ15744 281 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 ZNF385BQ569K4 471 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 ACSM2BQ68CK6 577 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 TIGD3Q6B0B8 471 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 VASNQ6EMK4 673 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 ANGPTL8Q6UXH0 198 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 NUP54Q7Z3B4 507 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 TDRPQ86YL5 185 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 RELL2Q8NC24 303 aaPredicted RBP6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 FAM83FQ8NEG4 500 aaPredicted RBP6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 OR2T11Q8NH01 316 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 GFM2Q969S9 779 aaKnown RBP6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 SARAFQ96BY9 339 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 TMEM41AQ96HV5 264 aa6.66□□□□□ -1.34
PRPF4B-208ENST00000490653 ADOQ96SZ5 270 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms