RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 P2RY6Q15077 328 aa12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 TSNQ15631 228 aaKnown RBP12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 CCNG2Q16589 344 aa12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 HIST2H2ACQ16777 129 aaPredicted RBP12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 HIST2H2AA3Q6FI13 130 aa12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 MRM1Q6IN84 353 aaKnown RBP12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 CAVIN1Q6NZI2 390 aaKnown RBP12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 FAM111BQ6SJ93 734 aa12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 TREML4Q6UXN2 200 aa12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 FRA10AC1Q70Z53 315 aa12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 CCDC25Q86WR0 208 aa12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 CCDC170Q8IYT3 715 aa12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 MUC15Q8N387 334 aa12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 ZCCHC7Q8N3Z6 543 aaKnown RBP12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 RGMAQ96B86 450 aa12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 CMTM7Q96FZ5 175 aa12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 PIMREGQ9BSJ6 248 aa12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 ASIC3Q9UHC3 531 aa12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 BCAP29Q9UHQ4 241 aa12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 VWA7Q9Y334 891 aa12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 REXO2Q9Y3B8 237 aaKnown RBP12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 PCDHGB1Q9Y5G3 927 aa12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 OR6C70A6NIJ9 312 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 EIF1AYO14602 144 aaKnown RBP12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 CBFA2T2O43439 604 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 COL6A2P12110 1019 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 ZNF37AP17032 561 aaPredicted RBP12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 EPORP19235 508 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 PIK3R1P27986 724 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 AGTR1P30556 359 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 MAGEA6P43360 314 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 HSPA7P48741 367 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 PDLIM4P50479 330 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 TBX2Q13207 712 aaPredicted RBP12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 LAPTM5Q13571 262 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 IQCCQ4KMZ1 466 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 AWAT1Q58HT5 328 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 PAGE2BQ5JRK9 111 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 C6orf163Q5TEZ5 329 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 GGNQ86UU5 652 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 FBXL14Q8N1E6 418 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 GBP7Q8N8V2 638 aaPredicted RBP12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 FADS6Q8N9I5 356 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 OR2M3Q8NG83 312 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 FAM216AQ8WUB2 273 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 KISS1RQ969F8 398 aaPredicted RBP12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 FOXN4Q96NZ1 517 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 ADOQ96SZ5 270 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 DHRS9Q9BPW9 319 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 ZNF717Q9BY31 904 aaPredicted RBP12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 METTL17Q9H7H0 456 aaPredicted RBP12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 MED11Q9P086 117 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 PPP4R1LQ9P1A2 415 aa12.13□□□□□ -0.47
EXOSC3-207ENST00000490516 A0A0A6YYD5 115 aa12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 SHISA8B8ZZ34 492 aa12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 ADAP00813 363 aa12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 FAM58BPP0C7Q3 252 aa12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 MLNP12872 115 aa12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 IRF8Q02556 426 aa12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 DDX39BQ13838 428 aaKnown RBP12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 ZNF460Q14592 562 aa12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 PDK4Q16654 411 aa12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 OR52E8Q6IFG1 317 aa12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 RINLQ6ZS11 566 aa12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 LAS2Q8IYD9 372 aa12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 SYCE1Q8N0S2 351 aa12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 LRRC17Q8N6Y2 441 aa12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 OR7G3Q8NG95 312 aa12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 OR52B6Q8NGF0 335 aa12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 SIGLEC10Q96LC7 697 aa12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 NAP1L3Q99457 506 aaPredicted RBP12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 POTEKPQ9BYX7 375 aa12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 BRINP2Q9C0B6 783 aa12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 WDR41Q9HAD4 459 aa12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 ZBTB26Q9HCK0 441 aa12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 LYARQ9NX58 379 aaKnown RBP12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 NPAP1Q9NZP6 1156 aa12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 CTNNAL1Q9UBT7 734 aa12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 PLLPQ9Y342 182 aa12.12□□□□□ -0.47
EXOSC3-207ENST00000490516 HEATR1Q9H583 2144 aaKnown RBP12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 LRP5LA4QPB2 252 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 LINC01387J3KSC0 135 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 SCO2O43819 266 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 TUBBP07437 444 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 CPMP14384 443 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 ZNF23P17027 643 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 DRD5P21918 477 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 FABP6P51161 128 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 XKP51811 444 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 LGALS3BPQ08380 585 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 SPOCK1Q08629 439 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 MGAT2Q10469 447 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 CRYMQ14894 314 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 SLMAPQ14BN4 828 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 STK11Q15831 433 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 CARTPTQ16568 116 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 FAM45BPQ6NSW5 357 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 MED27Q6P2C8 311 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 DRICH1Q6PGQ1 229 aaPredicted RBP12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 CYP20A1Q6UW02 462 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms