RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 GPN1Q9HCN4 374 aaPredicted RBP4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 HPS4Q9NQG7 708 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 PANK4Q9NVE7 773 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 HACD3Q9P035 362 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 NDUFA13Q9P0J0 144 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 ZNF624Q9P2J8 865 aaPredicted RBP4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 PRDM4Q9UKN5 801 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 TP53TG5Q9Y2B4 290 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 C2CD2Q9Y426 696 aa4.24□□□□□ -1.73
SSX2IP-208ENST00000490476 MYOFQ9NZM1 2061 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 HERC2O95714 4834 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 TMEM129A0AVI4 362 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 MTMR11A4FU01 709 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 EFCAB7A8K855 629 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 TLR4O00206 839 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 BMPR1BO00238 502 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 ZNF195O14628 629 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 KLF11O14901 512 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 CHUKO15111 745 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 MLNRO43193 412 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 SEC22BO75396 215 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 RAF1P04049 648 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 CD48P09326 243 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 FAM157CP0CG43 387 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 LIPCP11150 499 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 SLC2A2P11168 524 aaPredicted RBP4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 MAPK3P27361 379 aaPredicted RBP4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 GJB2P29033 226 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 SLC1A3P43003 542 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 LUMP51884 338 aaPredicted RBP4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 DLX5P56178 289 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 SGCGQ13326 291 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 ITGA9Q13797 1035 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 TEAD2Q15562 447 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 PSMD5Q16401 504 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 LRRC37A5PQ49AS3 106 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 BTN2A1Q7KYR7 527 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 NR2C2APQ86WQ0 139 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 EID2Q8N6I1 236 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 CCNYQ8ND76 341 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 OR4A16Q8NH70 328 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 APOBEC4Q8WW27 367 aaKnown RBP4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 ARHGAP45Q92619 1136 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 ZNF524Q96C55 264 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 TBC1D31Q96DN5 1066 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 DTD2Q96FN9 168 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 EEF2KMTQ96G04 330 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 C10orf90Q96M02 699 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 INPP4AQ96PE3 977 aaPredicted RBP4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 NAP1L3Q99457 506 aaPredicted RBP4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 FOXC2Q99958 501 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 XPO4Q9C0E2 1151 aaKnown RBP4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 ATP13A3Q9H7F0 1226 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 SYTL2Q9HCH5 934 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 PXMP2Q9NR77 195 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 EXOC1Q9NV70 894 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 PSORS1C1Q9UIG5 152 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 TRMT6Q9UJA5 497 aaKnown RBP4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 PLCL2Q9UPR0 1127 aa4.23□□□□□ -1.73
SSX2IP-208ENST00000490476 TRRAPQ9Y4A5 3859 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 A0A087WUV0 522 aaPredicted RBP4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 C2orf92A0A1B0GVN3 265 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 ZNF732B4DXR9 585 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 SGK1O00141 431 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 ADAM12O43184 909 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 CYTIPO60759 359 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 B3GALNT1O75752 331 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 IDH1O75874 414 aaKnown RBP4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 KRT36O76013 467 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 TNFSF15O95150 251 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 CLPTM1O96005 669 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 B4GALT1P15291 398 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 RPL35AP18077 110 aaKnown RBP4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 ACP1P24666 158 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 CSNK1EP49674 416 aaKnown RBP4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 DCDC1P59894 354 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 BTG1P62324 171 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 KRT31Q15323 416 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 ZRSR1Q15695 479 aaKnown RBP4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 SLC27A4Q6P1M0 643 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 MACC1Q6ZN28 852 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 MIER3Q7Z3K6 550 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 TRMT11Q7Z4G4 463 aaKnown RBP4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 FAM89BQ8N5H3 189 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 ALLCQ8N6M5 410 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 OR52E1Q8NGJ3 308 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 HAS2Q92819 552 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 PRAC1Q96KF2 57 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 C18orf12Q96KH6 178 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 NODALQ96S42 347 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 NKX3-1Q99801 234 aaPredicted RBP4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 FAM213AQ9BRX8 229 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 C3orf14Q9HBI5 128 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 HOOK1Q9UJC3 728 aaKnown RBP4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 EXOC7Q9UPT5 735 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 SH3GLB1Q9Y371 365 aa4.22□□□□□ -1.73
SSX2IP-208ENST00000490476 ANK3Q12955 4377 aaKnown RBP4.21□□□□□ -1.74
SSX2IP-208ENST00000490476 IGKV6D-41A0A0C4DH26 115 aa4.21□□□□□ -1.74
SSX2IP-208ENST00000490476 RNF103-CHMP3A0A140T963 221 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms