RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 CCBE1Q6UXH8 406 aaPredicted RBP8.4□□□□□ -1.06
LSAMP-205ENST00000490035 KLHDC8AQ8IYD2 350 aa8.4□□□□□ -1.06
LSAMP-205ENST00000490035 OR8K5Q8NH50 307 aa8.4□□□□□ -1.06
LSAMP-205ENST00000490035 PDLIM5Q96HC4 596 aaKnown RBP8.4□□□□□ -1.06
LSAMP-205ENST00000490035 PREBQ9HCU5 417 aa8.4□□□□□ -1.06
LSAMP-205ENST00000490035 IGKV6D-21A0A0A0MT36 114 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 FAM230AA0A1W2PPH8 454 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 MTX2O75431 263 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 AGTR2P50052 363 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 EVX2Q03828 476 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 DNASE1L3Q13609 305 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 FAM205BPQ63HN1 556 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 MISPQ8IVT2 679 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 STEAP2Q8NFT2 490 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 MSANTD3Q96H12 275 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 STRA6Q9BX79 667 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 CACNG6Q9BXT2 260 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 DCAF13Q9NV06 445 aaKnown RBP8.4□□□□□ -1.07
LSAMP-205ENST00000490035 ADAM29Q9UKF5 820 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 ERVK-19Q9WJR5 959 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 KCNK6Q9Y257 313 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 OR6C74A6NCV1 312 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 RNF212BA8MTL3 300 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 KHNYNO15037 678 aaKnown RBP8.4□□□□□ -1.07
LSAMP-205ENST00000490035 UPK1BO75841 260 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 PRKCGP05129 697 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 MAP2K4P45985 399 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 CRYZQ08257 329 aaKnown RBP8.4□□□□□ -1.07
LSAMP-205ENST00000490035 PON2Q15165 354 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 SLC35F1Q5T1Q4 408 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 AKR1C8PQ5T2L2 129 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 PLAG1Q6DJT9 500 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 LRFN4Q6PJG9 635 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 TAS1R3Q7RTX0 852 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 UEVLDQ8IX04 471 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 ADAMTS14Q8WXS8 1223 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 TGM7Q96PF1 710 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 TXN2Q99757 166 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 NPAP1Q9NZP6 1156 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 FBXO7Q9Y3I1 522 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 ACTL6BO94805 426 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 OR1E2P47887 323 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 NFATC3Q12968 1075 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 AADACL4Q5VUY2 407 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 SPRYD4Q8WW59 207 aaPredicted RBP8.4□□□□□ -1.07
LSAMP-205ENST00000490035 FUBP1Q96AE4 644 aaKnown RBP8.4□□□□□ -1.07
LSAMP-205ENST00000490035 TBC1D20Q96BZ9 403 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 DPH7Q9BTV6 452 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 SLC25A31Q9H0C2 315 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 ARL6Q9H0F7 186 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 OR6C2Q9NZP2 312 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 KCNS2Q9ULS6 477 aa8.4□□□□□ -1.07
LSAMP-205ENST00000490035 PCM1Q15154 2024 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 ATE1O95260 518 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 TPT1P13693 172 aaKnown RBP8.39□□□□□ -1.07
LSAMP-205ENST00000490035 DIO3P55073 304 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 TMEM53Q6P2H8 277 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 FOXRED2Q8IWF2 684 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 LRRC56Q8IYG6 542 aaPredicted RBP8.39□□□□□ -1.07
LSAMP-205ENST00000490035 CPXM2Q8N436 756 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 PHYHIPQ92561 330 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 TRMT2BQ96GJ1 504 aaKnown RBP8.39□□□□□ -1.07
LSAMP-205ENST00000490035 GAL3ST1Q99999 423 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 IL23AQ9NPF7 189 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 IGKV6-21A0A0C4DH24 114 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 RDH16O75452 317 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 FKBP2P26885 142 aaKnown RBP8.39□□□□□ -1.07
LSAMP-205ENST00000490035 ETV3P41162 512 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 NCS1P62166 190 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 SGCAQ16586 387 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 TMEM244Q5VVB8 128 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 TRIM46Q7Z4K8 759 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 ISCA2Q86U28 154 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 TCTEX1D2Q8WW35 142 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 CCDC120Q96HB5 630 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 PRRC1Q96M27 445 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 ANHXE9PGG2 379 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 GPR137BO60478 399 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 CHRM5P08912 532 aaPredicted RBP8.39□□□□□ -1.07
LSAMP-205ENST00000490035 ICAM2P13598 275 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 CCNOP22674 350 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 RBMS1P29558 406 aaKnown RBP8.39□□□□□ -1.07
LSAMP-205ENST00000490035 PYCR1P32322 319 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 CSNK2A1P68400 391 aaPredicted RBP8.39□□□□□ -1.07
LSAMP-205ENST00000490035 OR8S1Q8NH09 359 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 MUL1Q969V5 352 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 WDR77Q9BQA1 342 aaPredicted RBP8.39□□□□□ -1.07
LSAMP-205ENST00000490035 PLEKHA3Q9HB20 300 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 PCDHGA8Q9Y5G5 932 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 GGT3PA6NGU5 568 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 RIN1Q13671 783 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 APOFQ13790 326 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 NDUFAF5Q5TEU4 345 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 TMEM107Q6UX40 140 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 CNTN4Q8IWV2 1026 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 BEST4Q8NFU0 473 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 GCDHQ92947 438 aaPredicted RBP8.39□□□□□ -1.07
LSAMP-205ENST00000490035 BTBD2Q9BX70 525 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 SIAEQ9HAT2 523 aa8.39□□□□□ -1.07
LSAMP-205ENST00000490035 TMEM100Q9NV29 134 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms