RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 ZNF681Q96N22 645 aa15.32■□□□□ 0.04
TOP3B-217ENST00000489581 SLC39A3Q9BRY0 314 aa15.32■□□□□ 0.04
TOP3B-217ENST00000489581 VPS11Q9H270 941 aa15.32■□□□□ 0.04
TOP3B-217ENST00000489581 ELOVL6Q9H5J4 265 aa15.32■□□□□ 0.04
TOP3B-217ENST00000489581 RNF14Q9UBS8 474 aa15.32■□□□□ 0.04
TOP3B-217ENST00000489581 TRPS1Q9UHF7 1281 aa15.32■□□□□ 0.04
TOP3B-217ENST00000489581 ADAM21Q9UKJ8 722 aa15.32■□□□□ 0.04
TOP3B-217ENST00000489581 PCTPQ9UKL6 214 aa15.32■□□□□ 0.04
TOP3B-217ENST00000489581 H0YC42 278 aa15.31■□□□□ 0.04
TOP3B-217ENST00000489581 C16orf97H3BN30 126 aa15.31■□□□□ 0.04
TOP3B-217ENST00000489581 CNOT4O95628 575 aaKnown RBP15.31■□□□□ 0.04
TOP3B-217ENST00000489581 PDYNP01213 254 aa15.31■□□□□ 0.04
TOP3B-217ENST00000489581 ALDOAP04075 364 aaKnown RBP15.31■□□□□ 0.04
TOP3B-217ENST00000489581 CT45A8P0DMV1 189 aa15.31■□□□□ 0.04
TOP3B-217ENST00000489581 CT45A9P0DMV2 189 aa15.31■□□□□ 0.04
TOP3B-217ENST00000489581 PEPDP12955 493 aa15.31■□□□□ 0.04
TOP3B-217ENST00000489581 LOXP28300 417 aaPredicted RBP15.31■□□□□ 0.04
TOP3B-217ENST00000489581 IL12BP29460 328 aa15.31■□□□□ 0.04
TOP3B-217ENST00000489581 KRT20P35900 424 aa15.31■□□□□ 0.04
TOP3B-217ENST00000489581 GAS1P54826 345 aa15.31■□□□□ 0.04
TOP3B-217ENST00000489581 TPD52P55327 224 aaPredicted RBP15.31■□□□□ 0.04
TOP3B-217ENST00000489581 TRADDQ15628 312 aa15.31■□□□□ 0.04
TOP3B-217ENST00000489581 CT45A2Q5DJT8 189 aa15.31■□□□□ 0.04
TOP3B-217ENST00000489581 C20orf204Q6ZNR8 217 aa15.31■□□□□ 0.04
TOP3B-217ENST00000489581 LARP4Q71RC2 724 aaKnown RBP eCLIP15.31■□□□□ 0.04
TOP3B-217ENST00000489581 CXXC5Q7LFL8 322 aaKnown RBP15.31■□□□□ 0.04
TOP3B-217ENST00000489581 OR4K17Q8NGC6 315 aa15.31■□□□□ 0.04
TOP3B-217ENST00000489581 SELENOMQ8WWX9 145 aa15.31■□□□□ 0.04
TOP3B-217ENST00000489581 KAT2AQ92830 837 aa15.31■□□□□ 0.04
TOP3B-217ENST00000489581 MARK4Q96L34 752 aa15.31■□□□□ 0.04
TOP3B-217ENST00000489581 BTBD9Q96Q07 612 aa15.31■□□□□ 0.04
TOP3B-217ENST00000489581 LRRC1Q9BTT6 524 aa15.31■□□□□ 0.04
TOP3B-217ENST00000489581 FAIM2Q9BWQ8 316 aa15.31■□□□□ 0.04
TOP3B-217ENST00000489581 ELOVL5Q9NYP7 299 aa15.31■□□□□ 0.04
TOP3B-217ENST00000489581 ABCA1O95477 2261 aa15.31■□□□□ 0.04
TOP3B-217ENST00000489581 PPP6CO00743 305 aa15.3■□□□□ 0.04
TOP3B-217ENST00000489581 ESRRBO95718 433 aa15.3■□□□□ 0.04
TOP3B-217ENST00000489581 CGAP01215 116 aa15.3■□□□□ 0.04
TOP3B-217ENST00000489581 PTH2RP49190 550 aa15.3■□□□□ 0.04
TOP3B-217ENST00000489581 SUCLG1P53597 346 aaKnown RBP15.3■□□□□ 0.04
TOP3B-217ENST00000489581 DSCR4P56555 118 aaPredicted RBP15.3■□□□□ 0.04
TOP3B-217ENST00000489581 CLDN15P56746 228 aa15.3■□□□□ 0.04
TOP3B-217ENST00000489581 C2orf54Q08AI8 447 aa15.3■□□□□ 0.04
TOP3B-217ENST00000489581 EFR3AQ14156 821 aa15.3■□□□□ 0.04
TOP3B-217ENST00000489581 ZNF628Q5EBL2 1059 aa15.3■□□□□ 0.04
TOP3B-217ENST00000489581 C10orf62Q5T681 223 aaPredicted RBP15.3■□□□□ 0.04
TOP3B-217ENST00000489581 NPSR1Q6W5P4 371 aa15.3■□□□□ 0.04
TOP3B-217ENST00000489581 MEIOBQ8N635 442 aa15.3■□□□□ 0.04
TOP3B-217ENST00000489581 C1orf52Q8N6N3 182 aaKnown RBP15.3■□□□□ 0.04
TOP3B-217ENST00000489581 ZNF610Q8N9Z0 462 aa15.3■□□□□ 0.04
TOP3B-217ENST00000489581 SPATA4Q8NEY3 305 aa15.3■□□□□ 0.04
TOP3B-217ENST00000489581 EFHD2Q96C19 240 aaPredicted RBP15.3■□□□□ 0.04
TOP3B-217ENST00000489581 HBEGFQ99075 208 aa15.3■□□□□ 0.04
TOP3B-217ENST00000489581 REPIN1Q9BWE0 567 aaKnown RBP15.3■□□□□ 0.04
TOP3B-217ENST00000489581 PINK1Q9BXM7 581 aa15.3■□□□□ 0.04
TOP3B-217ENST00000489581 GSX2Q9BZM3 304 aa15.3■□□□□ 0.04
TOP3B-217ENST00000489581 KLHL4Q9C0H6 718 aa15.3■□□□□ 0.04
TOP3B-217ENST00000489581 DSN1Q9H410 356 aa15.3■□□□□ 0.04
TOP3B-217ENST00000489581 UTS2RQ9UKP6 389 aa15.3■□□□□ 0.04
TOP3B-217ENST00000489581 STX16-NPEPL1H3BU86 382 aa15.29■□□□□ 0.04
TOP3B-217ENST00000489581 STX16O14662 325 aa15.29■□□□□ 0.04
TOP3B-217ENST00000489581 SEC14L5O43304 696 aa15.29■□□□□ 0.04
TOP3B-217ENST00000489581 SCO2O43819 266 aa15.29■□□□□ 0.04
TOP3B-217ENST00000489581 BCAS2O75934 225 aaPredicted RBP15.29■□□□□ 0.04
TOP3B-217ENST00000489581 TSPAN8P19075 237 aa15.29■□□□□ 0.04
TOP3B-217ENST00000489581 HK1P19367 917 aa15.29■□□□□ 0.04
TOP3B-217ENST00000489581 SERPINB8P50452 374 aa15.29■□□□□ 0.04
TOP3B-217ENST00000489581 GUCY2DQ02846 1103 aa15.29■□□□□ 0.04
TOP3B-217ENST00000489581 CAV1Q03135 178 aa15.29■□□□□ 0.04
TOP3B-217ENST00000489581 GGTA1PQ4G0N0 100 aa15.29■□□□□ 0.04
TOP3B-217ENST00000489581 RAET1LQ5VY80 246 aa15.29■□□□□ 0.04
TOP3B-217ENST00000489581 LETMD1Q6P1Q0 360 aa15.29■□□□□ 0.04
TOP3B-217ENST00000489581 ZDHHC24Q6UX98 284 aa15.29■□□□□ 0.04
TOP3B-217ENST00000489581 PLEKHM3Q6ZWE6 761 aa15.29■□□□□ 0.04
TOP3B-217ENST00000489581 SLC44A2Q8IWA5 706 aaPredicted RBP15.29■□□□□ 0.04
TOP3B-217ENST00000489581 GBP7Q8N8V2 638 aaPredicted RBP15.29■□□□□ 0.04
TOP3B-217ENST00000489581 OR4N2Q8NGD1 307 aa15.29■□□□□ 0.04
TOP3B-217ENST00000489581 OR9A2Q8NGT5 310 aa15.29■□□□□ 0.04
TOP3B-217ENST00000489581 FNDC9Q8TBE3 224 aa15.29■□□□□ 0.04
TOP3B-217ENST00000489581 ZNF675Q8TD23 568 aa15.29■□□□□ 0.04
TOP3B-217ENST00000489581 RNF138Q8WVD3 245 aa15.29■□□□□ 0.04
TOP3B-217ENST00000489581 FOLH1BQ9HBA9 442 aa15.29■□□□□ 0.04
TOP3B-217ENST00000489581 MED11Q9P086 117 aa15.29■□□□□ 0.04
TOP3B-217ENST00000489581 PPP4R1LQ9P1A2 415 aa15.29■□□□□ 0.04
TOP3B-217ENST00000489581 UTP11Q9Y3A2 253 aaKnown RBP15.29■□□□□ 0.04
TOP3B-217ENST00000489581 ZNF337Q9Y3M9 751 aa15.29■□□□□ 0.04
TOP3B-217ENST00000489581 EMC8O43402 210 aa15.28■□□□□ 0.04
TOP3B-217ENST00000489581 TNFRSF21O75509 655 aa15.28■□□□□ 0.04
TOP3B-217ENST00000489581 RBP1P09455 135 aa15.28■□□□□ 0.04
TOP3B-217ENST00000489581 CTAGE8P0CG41 777 aa15.28■□□□□ 0.04
TOP3B-217ENST00000489581 PNLIPRP2P54317 469 aa15.28■□□□□ 0.04
TOP3B-217ENST00000489581 CDH13P55290 713 aa15.28■□□□□ 0.04
TOP3B-217ENST00000489581 TRA2BP62995 288 aaKnown RBP15.28■□□□□ 0.04
TOP3B-217ENST00000489581 ERCC6LQ2NKX8 1250 aa15.28■□□□□ 0.04
TOP3B-217ENST00000489581 CTAGE4Q8IX94 777 aa15.28■□□□□ 0.04
TOP3B-217ENST00000489581 FADS6Q8N9I5 356 aa15.28■□□□□ 0.04
TOP3B-217ENST00000489581 OR2M3Q8NG83 312 aa15.28■□□□□ 0.04
TOP3B-217ENST00000489581 OR5M1Q8NGP8 315 aa15.28■□□□□ 0.04
TOP3B-217ENST00000489581 SPATA3Q8NHX4 192 aa15.28■□□□□ 0.04
TOP3B-217ENST00000489581 EXOSC8Q96B26 276 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms