RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 STX3Q13277 289 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 PDE7AQ13946 482 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 DECR1Q16698 335 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 PRSS53Q2L4Q9 553 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 VPS26BQ4G0F5 336 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 CYP27C1Q4G0S4 372 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 TNFAIP8L3Q5GJ75 292 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 C6orf136Q5SQH8 315 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 ANKRD26P1Q6NSI1 321 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 ANGPTL8Q6UXH0 198 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 ZNF551Q7Z340 670 aaPredicted RBP12.35□□□□□ -0.43
LMO4-203ENST00000489303 ZNF295-AS1Q8N0V1 137 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 NATD1Q8N6N6 113 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 ANKRD42Q8N9B4 389 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 CEP70Q8NHQ1 597 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 NEIL3Q8TAT5 605 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 CA5BP1Q8WTZ4 195 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 ASB5Q8WWX0 329 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 RND1Q92730 232 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 ZBTB9Q96C00 473 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 SDCCAG3Q96C92 435 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 GNRHR2Q96P88 292 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 SLC6A15Q9H2J7 730 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 PNPLA3Q9NST1 481 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 ACSS1Q9NUB1 689 aaPredicted RBP12.35□□□□□ -0.43
LMO4-203ENST00000489303 ATAD3AQ9NVI7 634 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 ALKBH4Q9NXW9 302 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 C15orf41Q9Y2V0 281 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 RAP2CQ9Y3L5 183 aa12.35□□□□□ -0.43
LMO4-203ENST00000489303 FAM47E-STBD1D6RA91 191 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 SNPHO15079 494 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 TSPAN2O60636 221 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 CBR3O75828 277 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 HPNP05981 417 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 DHRS4L1P0CG22 281 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 ARRB2P32121 409 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 PTGER4P35408 488 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 KIR3DL1P43629 444 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 CLK3P49761 638 aaKnown RBP12.34□□□□□ -0.43
LMO4-203ENST00000489303 CDK9P50750 372 aaKnown RBP12.34□□□□□ -0.43
LMO4-203ENST00000489303 RPL14P50914 215 aaKnown RBP12.34□□□□□ -0.43
LMO4-203ENST00000489303 PRKAG1P54619 331 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 SF3B4Q15427 424 aaKnown RBP eCLIP12.34□□□□□ -0.43
LMO4-203ENST00000489303 CPTPQ5TA50 214 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 IL23RQ5VWK5 629 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 NPSR1Q6W5P4 371 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 B3GNT6Q6ZMB0 384 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 SZRD1Q7Z422 152 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 OR10Q1Q8NGQ4 319 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 CIDECQ96AQ7 238 aaPredicted RBP12.34□□□□□ -0.43
LMO4-203ENST00000489303 EFHD2Q96C19 240 aaPredicted RBP12.34□□□□□ -0.43
LMO4-203ENST00000489303 C1orf50Q9BV19 199 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 TRIM8Q9BZR9 551 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 NKIRAS1Q9NYS0 192 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 GIMAP2Q9UG22 337 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 ATP6V1HQ9UI12 483 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 CBLCQ9ULV8 474 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 MAPRE3Q9UPY8 281 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 PCDHGB3Q9Y5G1 929 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 HRH3Q9Y5N1 445 aa12.34□□□□□ -0.43
LMO4-203ENST00000489303 AKAP9Q99996 3911 aa12.33□□□□□ -0.43
LMO4-203ENST00000489303 SCAMP2O15127 329 aaKnown RBP12.33□□□□□ -0.44
LMO4-203ENST00000489303 ITM2AO43736 263 aa12.33□□□□□ -0.44
LMO4-203ENST00000489303 NME6O75414 186 aaPredicted RBP12.33□□□□□ -0.44
LMO4-203ENST00000489303 KCNH1O95259 989 aa12.33□□□□□ -0.44
LMO4-203ENST00000489303 BGNP21810 368 aa12.33□□□□□ -0.44
LMO4-203ENST00000489303 PTPN6P29350 595 aa12.33□□□□□ -0.44
LMO4-203ENST00000489303 PRR5P85299 388 aa12.33□□□□□ -0.44
LMO4-203ENST00000489303 PSG6Q00889 435 aa12.33□□□□□ -0.44
LMO4-203ENST00000489303 PMPCAQ10713 525 aa12.33□□□□□ -0.44
LMO4-203ENST00000489303 PDCD2Q16342 344 aaPredicted RBP12.33□□□□□ -0.44
LMO4-203ENST00000489303 SMU1Q2TAY7 513 aa12.33□□□□□ -0.44
LMO4-203ENST00000489303 EMC4Q5J8M3 183 aa12.33□□□□□ -0.44
LMO4-203ENST00000489303 BEND6Q5SZJ8 279 aaPredicted RBP12.33□□□□□ -0.44
LMO4-203ENST00000489303 DESI1Q6ICB0 168 aa12.33□□□□□ -0.44
LMO4-203ENST00000489303 PM20D2Q8IYS1 436 aa12.33□□□□□ -0.44
LMO4-203ENST00000489303 ZNF781Q8N8C0 355 aa12.33□□□□□ -0.44
LMO4-203ENST00000489303 NUP43Q8NFH3 380 aa12.33□□□□□ -0.44
LMO4-203ENST00000489303 OR4N2Q8NGD1 307 aa12.33□□□□□ -0.44
LMO4-203ENST00000489303 C3orf30Q96M34 536 aa12.33□□□□□ -0.44
LMO4-203ENST00000489303 LMF2Q9BU23 707 aaKnown RBP12.33□□□□□ -0.44
LMO4-203ENST00000489303 UBQLN3Q9H347 655 aa12.33□□□□□ -0.44
LMO4-203ENST00000489303 GALNT9Q9HCQ5 603 aa12.33□□□□□ -0.44
LMO4-203ENST00000489303 EQTNQ9NQ60 294 aa12.33□□□□□ -0.44
LMO4-203ENST00000489303 SDHAF3Q9NRP4 125 aa12.33□□□□□ -0.44
LMO4-203ENST00000489303 NOP53Q9NZM5 478 aaKnown RBP12.33□□□□□ -0.44
LMO4-203ENST00000489303 SPRR3Q9UBC9 169 aa12.33□□□□□ -0.44
LMO4-203ENST00000489303 TNFRSF10DQ9UBN6 386 aa12.33□□□□□ -0.44
LMO4-203ENST00000489303 WIF1Q9Y5W5 379 aa12.33□□□□□ -0.44
LMO4-203ENST00000489303 PKDREJQ9NTG1 2253 aa12.32□□□□□ -0.44
LMO4-203ENST00000489303 A0A1W2PRB8 838 aa12.32□□□□□ -0.44
LMO4-203ENST00000489303 TMEM120BA0PK00 339 aa12.32□□□□□ -0.44
LMO4-203ENST00000489303 C2orf72A6NCS6 295 aa12.32□□□□□ -0.44
LMO4-203ENST00000489303 EMC8O43402 210 aa12.32□□□□□ -0.44
LMO4-203ENST00000489303 PSMG1O95456 288 aa12.32□□□□□ -0.44
LMO4-203ENST00000489303 COX6B1P14854 86 aa12.32□□□□□ -0.44
LMO4-203ENST00000489303 PRPS1L1P21108 318 aa12.32□□□□□ -0.44
LMO4-203ENST00000489303 ENDOUP21128 410 aaKnown RBP12.32□□□□□ -0.44
LMO4-203ENST00000489303 CHRNB4P30926 498 aa12.32□□□□□ -0.44
LMO4-203ENST00000489303 GABRA3P34903 492 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms