RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 GAS1P54826 345 aa10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 PSG6Q00889 435 aa10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 GAB1Q13480 694 aa10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 KIAA0040Q15053 153 aa10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 ANKRD26P1Q6NSI1 321 aa10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 POMZP3Q6PJE2 187 aa10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 PLXDC2Q6UX71 529 aa10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 ZZZ3Q8IYH5 903 aa10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 ZPLD1Q8TCW7 415 aa10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 ELP4Q96EB1 424 aa10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 TUBA1CQ9BQE3 449 aa10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 OR2B2Q9GZK3 357 aa10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 ANKZF1Q9H8Y5 726 aa10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 CALHM2Q9HA72 323 aa10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 LRTM1Q9HBL6 345 aa10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 SLC24A3Q9HC58 644 aa10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 DDX18Q9NVP1 670 aaKnown RBP10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 C1orf109Q9NX04 203 aa10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 FLRT3Q9NZU0 649 aa10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 ZNF629Q9UEG4 869 aaPredicted RBP10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 C19orf53Q9UNZ5 99 aaPredicted RBP10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 WBP11Q9Y2W2 641 aaKnown RBP10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 WIF1Q9Y5W5 379 aa10.85□□□□□ -0.67
CCHCR1-215ENST00000488920 B4DXG7 233 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 H0Y3Z8 333 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 PLOD2O00469 737 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 AKAP10O43572 662 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 SCO2O43819 266 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 ZIC3O60481 467 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 TRIM13O60858 407 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 CTSSP25774 331 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 ALDH3A1P30838 453 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 GFRA1P56159 465 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 PSPHP78330 225 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 MRPS22P82650 360 aaKnown RBP10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 RCAN2Q14206 197 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 PCLAFQ15004 111 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 CYP27C1Q4G0S4 372 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 ENPP6Q6UWR7 440 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 Q6ZSR9 355 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 IKBIPQ70UQ0 350 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 ZNF551Q7Z340 670 aaPredicted RBP10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 IFNEQ86WN2 208 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 OR2L13Q8N349 312 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 BANPQ8N9N5 519 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 C9orf106Q8NAJ2 232 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 OR2T11Q8NH01 316 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 NRGNQ92686 78 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 RNASE6Q93091 150 aaKnown RBP10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 CIDECQ96AQ7 238 aaPredicted RBP10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 SH3GL2Q99962 352 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 IQCGQ9H095 443 aaKnown RBP10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 TUBB1Q9H4B7 451 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 CRIM1Q9NZV1 1036 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 BAIAP2L1Q9UHR4 511 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 MID2Q9UJV3 735 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 DKKL1Q9UK85 242 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 CBLCQ9ULV8 474 aa10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 RPH3AQ9Y2J0 694 aaPredicted RBP10.84□□□□□ -0.67
CCHCR1-215ENST00000488920 MBD3L4A6NDZ8 208 aaPredicted RBP10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 MBD3L3A6NE82 208 aaPredicted RBP10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 MBD3L5A6NJ08 208 aaPredicted RBP10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 FADS1O60427 444 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 SPAG7O75391 227 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 SLITRK5O94991 958 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 PSMG1O95456 288 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 CHRNGP07510 517 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 PRPH2P23942 346 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 DPP4P27487 766 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 SRD5A2P31213 254 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 GABRA3P34903 492 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 EVI2BP34910 448 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 RFX3P48380 749 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 ASCL1P50553 236 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 DGKQP52824 942 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 VSNL1P62760 191 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 FOXF2Q12947 444 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 HSPB3Q12988 150 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 STX5Q13190 355 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 DECR1Q16698 335 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 RFTN2Q52LD8 501 aaPredicted RBP10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 AAGABQ6PD74 315 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 OR4K17Q8NGC6 315 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 CLHC1Q8NHS4 586 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 MBD3L2Q8NHZ7 208 aaPredicted RBP10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 RNF138Q8WVD3 245 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 LRRC46Q96FV0 321 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 METTL2AQ96IZ6 378 aaKnown RBP10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 SFXN2Q96NB2 322 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 TSSK3Q96PN8 268 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 FAM111AQ96PZ2 611 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 TRMOQ9BU70 441 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 MECRQ9BV79 373 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 RTN4RQ9BZR6 473 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 DSN1Q9H410 356 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 DNAJB12Q9NXW2 375 aaKnown RBP10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 PPP4R1LQ9P1A2 415 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 SLC17A7Q9P2U7 560 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 DNAJC15Q9Y5T4 150 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms