RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 ZDHHC11Q9H8X9 412 aa17.11■□□□□ 0.33
PTCD3-217ENST00000488801 Q9N2J8 555 aa17.11■□□□□ 0.33
PTCD3-217ENST00000488801 NPHS2Q9NP85 383 aa17.11■□□□□ 0.33
PTCD3-217ENST00000488801 EQTNQ9NQ60 294 aa17.11■□□□□ 0.33
PTCD3-217ENST00000488801 SERHLQ9NQF3 203 aa17.11■□□□□ 0.33
PTCD3-217ENST00000488801 FGFR1OP2Q9NVK5 253 aa17.11■□□□□ 0.33
PTCD3-217ENST00000488801 TUBA8Q9NY65 449 aaPredicted RBP17.11■□□□□ 0.33
PTCD3-217ENST00000488801 CBLCQ9ULV8 474 aa17.11■□□□□ 0.33
PTCD3-217ENST00000488801 PTPN13Q12923 2485 aa17.1■□□□□ 0.33
PTCD3-217ENST00000488801 G3V3Y1 287 aa17.1■□□□□ 0.33
PTCD3-217ENST00000488801 WISP1O95388 367 aa17.1■□□□□ 0.33
PTCD3-217ENST00000488801 S100A3P33764 101 aa17.1■□□□□ 0.33
PTCD3-217ENST00000488801 CASP3P42574 277 aa17.1■□□□□ 0.33
PTCD3-217ENST00000488801 DGKQP52824 942 aa17.1■□□□□ 0.33
PTCD3-217ENST00000488801 GAB1Q13480 694 aa17.1■□□□□ 0.33
PTCD3-217ENST00000488801 RCAN2Q14206 197 aa17.1■□□□□ 0.33
PTCD3-217ENST00000488801 ZNHIT3Q15649 155 aaPredicted RBP17.1■□□□□ 0.33
PTCD3-217ENST00000488801 DUSP5Q16690 384 aa17.1■□□□□ 0.33
PTCD3-217ENST00000488801 PRAMEF20Q5VT98 475 aa17.1■□□□□ 0.33
PTCD3-217ENST00000488801 BICRALQ6AI39 1079 aa17.1■□□□□ 0.33
PTCD3-217ENST00000488801 CDC73Q6P1J9 531 aa17.1■□□□□ 0.33
PTCD3-217ENST00000488801 PAOXQ6QHF9 649 aa17.1■□□□□ 0.33
PTCD3-217ENST00000488801 BNC2Q6ZN30 1099 aaPredicted RBP17.1■□□□□ 0.33
PTCD3-217ENST00000488801 CHERPQ8IWX8 916 aaKnown RBP17.1■□□□□ 0.33
PTCD3-217ENST00000488801 MIER2Q8N344 545 aa17.1■□□□□ 0.33
PTCD3-217ENST00000488801 FAM110BQ8TC76 370 aa17.1■□□□□ 0.33
PTCD3-217ENST00000488801 C16orf58Q96GQ5 468 aa17.1■□□□□ 0.33
PTCD3-217ENST00000488801 GPR137Q96N19 417 aa17.1■□□□□ 0.33
PTCD3-217ENST00000488801 COL21A1Q96P44 957 aa17.1■□□□□ 0.33
PTCD3-217ENST00000488801 STACQ99469 402 aa17.1■□□□□ 0.33
PTCD3-217ENST00000488801 DUSP22Q9NRW4 184 aa17.1■□□□□ 0.33
PTCD3-217ENST00000488801 PLSCR2Q9NRY7 297 aa17.1■□□□□ 0.33
PTCD3-217ENST00000488801 TMEM45AQ9NWC5 275 aa17.1■□□□□ 0.33
PTCD3-217ENST00000488801 SPTBN1Q01082 2364 aaKnown RBP17.09■□□□□ 0.33
PTCD3-217ENST00000488801 DOPEY1Q5JWR5 2465 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 GXYLT2A0PJZ3 443 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 CLEC18AA5D8T8 446 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 IL33O95760 270 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 IGKV1D-16P01601 117 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 IL6P05231 212 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 PRIM2P49643 509 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 RPP38P78345 283 aaKnown RBP17.09■□□□□ 0.33
PTCD3-217ENST00000488801 ALDH6A1Q02252 535 aaKnown RBP17.09■□□□□ 0.33
PTCD3-217ENST00000488801 LRRC74AQ0VAA2 488 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 SNTA1Q13424 505 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 EFR3AQ14156 821 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 LASP1Q14847 261 aaKnown RBP17.09■□□□□ 0.33
PTCD3-217ENST00000488801 VPS26BQ4G0F5 336 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 CMPK2Q5EBM0 449 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 CLEC18BQ6UXF7 455 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 ATCAYQ86WG3 371 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 FUNDC1Q8IVP5 155 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 CLEC18CQ8NCF0 446 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 VPS37AQ8NEZ2 397 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 OR4A15Q8NGL6 344 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 OR5M3Q8NGP4 307 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 MIPOL1Q8TD10 442 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 TMEM41AQ96HV5 264 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 ZBTB18Q99592 522 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 ZNF703Q9H7S9 590 aaPredicted RBP17.09■□□□□ 0.33
PTCD3-217ENST00000488801 IL1RL2Q9HB29 575 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 SLC52A3Q9NQ40 469 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 SNX8Q9Y5X2 465 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 KIAA1549Q9HCM3 1950 aa17.09■□□□□ 0.33
PTCD3-217ENST00000488801 SPTAN1Q13813 2472 aaKnown RBP17.09■□□□□ 0.33
PTCD3-217ENST00000488801 CACNA1CQ13936 2221 aa17.08■□□□□ 0.33
PTCD3-217ENST00000488801 FAM234BA2RU67 622 aa17.08■□□□□ 0.32
PTCD3-217ENST00000488801 REM1O75628 298 aa17.08■□□□□ 0.32
PTCD3-217ENST00000488801 CYP4B1P13584 511 aa17.08■□□□□ 0.32
PTCD3-217ENST00000488801 HOXB9P17482 250 aaPredicted RBP17.08■□□□□ 0.32
PTCD3-217ENST00000488801 GNLYP22749 145 aa17.08■□□□□ 0.32
PTCD3-217ENST00000488801 PTPN6P29350 595 aa17.08■□□□□ 0.32
PTCD3-217ENST00000488801 RFC3P40938 356 aa17.08■□□□□ 0.32
PTCD3-217ENST00000488801 POLR2JP52435 117 aaKnown RBP17.08■□□□□ 0.32
PTCD3-217ENST00000488801 PRKAG1P54619 331 aa17.08■□□□□ 0.32
PTCD3-217ENST00000488801 GAS1P54826 345 aa17.08■□□□□ 0.32
PTCD3-217ENST00000488801 MRPS22P82650 360 aaKnown RBP17.08■□□□□ 0.32
PTCD3-217ENST00000488801 MRPL49Q13405 166 aaKnown RBP17.08■□□□□ 0.32
PTCD3-217ENST00000488801 TP53BP2Q13625 1128 aa17.08■□□□□ 0.32
PTCD3-217ENST00000488801 SAXO2Q658L1 398 aa17.08■□□□□ 0.32
PTCD3-217ENST00000488801 SZRD1Q7Z422 152 aa17.08■□□□□ 0.32
PTCD3-217ENST00000488801 OR5AK3PQ8NH89 298 aa17.08■□□□□ 0.32
PTCD3-217ENST00000488801 PIK3R3Q92569 461 aa17.08■□□□□ 0.32
PTCD3-217ENST00000488801 EFHD2Q96C19 240 aaPredicted RBP17.08■□□□□ 0.32
PTCD3-217ENST00000488801 THOC1Q96FV9 657 aaKnown RBP17.08■□□□□ 0.32
PTCD3-217ENST00000488801 RILPQ96NA2 401 aa17.08■□□□□ 0.32
PTCD3-217ENST00000488801 OR52E6Q96RD3 313 aa17.08■□□□□ 0.32
PTCD3-217ENST00000488801 ADOQ96SZ5 270 aa17.08■□□□□ 0.32
PTCD3-217ENST00000488801 ACTRT3Q9BYD9 372 aa17.08■□□□□ 0.32
PTCD3-217ENST00000488801 UBQLN3Q9H347 655 aa17.08■□□□□ 0.32
PTCD3-217ENST00000488801 PIGUQ9H490 435 aa17.08■□□□□ 0.32
PTCD3-217ENST00000488801 DCTN4Q9UJW0 460 aa17.08■□□□□ 0.32
PTCD3-217ENST00000488801 OR10H1Q9Y4A9 318 aa17.08■□□□□ 0.32
PTCD3-217ENST00000488801 HRH3Q9Y5N1 445 aa17.08■□□□□ 0.32
PTCD3-217ENST00000488801 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.08■□□□□ 0.32
PTCD3-217ENST00000488801 RNF103-CHMP3A0A140T963 221 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 ANKUB1A6NFN9 424 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 PRAMEF25A6NGN4 478 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 CFLARO15519 480 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 SNX4O95219 450 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms