RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 COPEO14579 308 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 PLIN3O60664 434 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 SLITRK5O94991 958 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 UROSP10746 265 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 CPA3P15088 417 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 GRK2P25098 689 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 DPP4P27487 766 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 CRHR1P34998 444 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 STARP49675 285 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 RIPPLY3P57055 190 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 EEF1A1P68104 462 aaKnown RBP11.31□□□□□ -0.6
SREBF1-215ENST00000487401 ZNHIT3Q15649 155 aaPredicted RBP11.31□□□□□ -0.6
SREBF1-215ENST00000487401 CYP27C1Q4G0S4 372 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 SH2D4BQ5SQS7 431 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 EEF1A1P5Q5VTE0 462 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 FAM71E1Q6IPT2 247 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 NOXRED1Q6NXP6 359 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 TMEM107Q6UX40 140 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 FRMD7Q6ZUT3 714 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 CHMP1BQ7LBR1 199 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 GSPT2Q8IYD1 628 aaKnown RBP11.31□□□□□ -0.6
SREBF1-215ENST00000487401 OR4N2Q8NGD1 307 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 WNT2BQ93097 391 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 EFHD2Q96C19 240 aaPredicted RBP11.31□□□□□ -0.6
SREBF1-215ENST00000487401 C11orf24Q96F05 449 aaPredicted RBP11.31□□□□□ -0.6
SREBF1-215ENST00000487401 ZFP3Q96NJ6 502 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 PPCSQ9HAB8 311 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 MYNNQ9NPC7 610 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 SDHAF3Q9NRP4 125 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 DDX18Q9NVP1 670 aaKnown RBP11.31□□□□□ -0.6
SREBF1-215ENST00000487401 MRTO4Q9UKD2 239 aaKnown RBP11.31□□□□□ -0.6
SREBF1-215ENST00000487401 C19orf53Q9UNZ5 99 aaPredicted RBP11.31□□□□□ -0.6
SREBF1-215ENST00000487401 MRPS18CQ9Y3D5 142 aaKnown RBP11.31□□□□□ -0.6
SREBF1-215ENST00000487401 POLR3HQ9Y535 204 aaPredicted RBP11.31□□□□□ -0.6
SREBF1-215ENST00000487401 CCDC168Q8NDH2 2452 aa11.31□□□□□ -0.6
SREBF1-215ENST00000487401 A0A087WV62 115 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 SMIM23A6NLE4 172 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 CLCA1A8K7I4 914 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 SLC28A1O00337 649 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 SEC22BO75396 215 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 RSL1D1O76021 490 aaKnown RBP11.3□□□□□ -0.6
SREBF1-215ENST00000487401 RCBTB2O95199 551 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 SHBGP04278 402 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 EPXP11678 715 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 TCEA1P23193 301 aaKnown RBP11.3□□□□□ -0.6
SREBF1-215ENST00000487401 DNASE1P24855 282 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 TACR1P25103 407 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 MC3RP41968 323 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 CPA2P48052 419 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 CLK3P49761 638 aaKnown RBP11.3□□□□□ -0.6
SREBF1-215ENST00000487401 LHX2P50458 406 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 IST1P53990 364 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 GFRA1P56159 465 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 DSCR4P56555 118 aaPredicted RBP11.3□□□□□ -0.6
SREBF1-215ENST00000487401 GAB1Q13480 694 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 DAZAP2Q15038 168 aaPredicted RBP11.3□□□□□ -0.6
SREBF1-215ENST00000487401 DECR1Q16698 335 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 SH2D5Q6ZV89 423 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 IKBIPQ70UQ0 350 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 EIF1ADQ8N9N8 165 aaKnown RBP11.3□□□□□ -0.6
SREBF1-215ENST00000487401 NINJ1Q92982 152 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 INTS12Q96CB8 462 aaKnown RBP11.3□□□□□ -0.6
SREBF1-215ENST00000487401 RMND5BQ96G75 393 aaPredicted RBP11.3□□□□□ -0.6
SREBF1-215ENST00000487401 SFXN3Q9BWM7 321 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 ACBD3Q9H3P7 528 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 GLIPR2Q9H4G4 154 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 Q9N2J8 555 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 OXSMQ9NWU1 459 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 TAS2R7Q9NYW3 318 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 PPP4R1LQ9P1A2 415 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 CBLCQ9ULV8 474 aa11.3□□□□□ -0.6
SREBF1-215ENST00000487401 RPH3AQ9Y2J0 694 aaPredicted RBP11.3□□□□□ -0.6
SREBF1-215ENST00000487401 PLOD2O00469 737 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 RGS14O43566 566 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 SCO2O43819 266 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 ZIC3O60481 467 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 KRT4P19013 534 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 HK1P19367 917 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 CHMP24386 653 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 EVI2BP34910 448 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 PSMD4P55036 377 aaKnown RBP11.29□□□□□ -0.6
SREBF1-215ENST00000487401 SORDQ00796 357 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 PSG6Q00889 435 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 FOXF2Q12947 444 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 BCL2A1Q16548 175 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 PRSS53Q2L4Q9 553 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 LIPMQ5VYY2 423 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 P4HA3Q7Z4N8 544 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 CDC20BQ86Y33 519 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 TDRPQ86YL5 185 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 GRAMD2AQ8IUY3 354 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 LINC01560Q8TB33 94 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.29□□□□□ -0.6
SREBF1-215ENST00000487401 ELP4Q96EB1 424 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 METTL2AQ96IZ6 378 aaKnown RBP11.29□□□□□ -0.6
SREBF1-215ENST00000487401 AMDHD1Q96NU7 426 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 UCN2Q96RP3 112 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 YIPF4Q9BSR8 244 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 RBM24Q9BX46 236 aaKnown RBP11.29□□□□□ -0.6
SREBF1-215ENST00000487401 IQCGQ9H095 443 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms