RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 PLTPP55058 493 aa17.54■□□□□ 0.4
SMPDL3A-202ENST00000487215 CLDN15P56746 228 aa17.54■□□□□ 0.4
SMPDL3A-202ENST00000487215 CORO7P57737 925 aa17.54■□□□□ 0.4
SMPDL3A-202ENST00000487215 EFR3AQ14156 821 aa17.54■□□□□ 0.4
SMPDL3A-202ENST00000487215 GGTA1PQ4G0N0 100 aa17.54■□□□□ 0.4
SMPDL3A-202ENST00000487215 CT45A2Q5DJT8 189 aa17.54■□□□□ 0.4
SMPDL3A-202ENST00000487215 ZNF628Q5EBL2 1059 aa17.54■□□□□ 0.4
SMPDL3A-202ENST00000487215 NPSR1Q6W5P4 371 aa17.54■□□□□ 0.4
SMPDL3A-202ENST00000487215 C22orf34Q6ZV56 151 aa17.54■□□□□ 0.4
SMPDL3A-202ENST00000487215 OR4F6Q8NGB9 312 aa17.54■□□□□ 0.4
SMPDL3A-202ENST00000487215 OR4K17Q8NGC6 315 aa17.54■□□□□ 0.4
SMPDL3A-202ENST00000487215 ZNF675Q8TD23 568 aa17.54■□□□□ 0.4
SMPDL3A-202ENST00000487215 ZNF845Q96IR2 970 aaPredicted RBP17.54■□□□□ 0.4
SMPDL3A-202ENST00000487215 RAB17Q9H0T7 212 aa17.54■□□□□ 0.4
SMPDL3A-202ENST00000487215 ZNF780BQ9Y6R6 833 aa17.54■□□□□ 0.4
SMPDL3A-202ENST00000487215 ZANQ9Y493 2812 aa17.54■□□□□ 0.4
SMPDL3A-202ENST00000487215 H0YC42 278 aa17.53■□□□□ 0.4
SMPDL3A-202ENST00000487215 EMC8O43402 210 aa17.53■□□□□ 0.4
SMPDL3A-202ENST00000487215 ALDOAP04075 364 aaKnown RBP17.53■□□□□ 0.4
SMPDL3A-202ENST00000487215 CD8BP10966 210 aa17.53■□□□□ 0.4
SMPDL3A-202ENST00000487215 IL12BP29460 328 aa17.53■□□□□ 0.4
SMPDL3A-202ENST00000487215 KRT20P35900 424 aa17.53■□□□□ 0.4
SMPDL3A-202ENST00000487215 KCNJ5P48544 419 aa17.53■□□□□ 0.4
SMPDL3A-202ENST00000487215 TPD52P55327 224 aaPredicted RBP17.53■□□□□ 0.4
SMPDL3A-202ENST00000487215 DSCR4P56555 118 aaPredicted RBP17.53■□□□□ 0.4
SMPDL3A-202ENST00000487215 LARP4Q71RC2 724 aaKnown RBP eCLIP17.53■□□□□ 0.4
SMPDL3A-202ENST00000487215 PLD6Q8N2A8 252 aaKnown RBP17.53■□□□□ 0.4
SMPDL3A-202ENST00000487215 MEIOBQ8N635 442 aa17.53■□□□□ 0.4
SMPDL3A-202ENST00000487215 FBXO25Q8TCJ0 367 aa17.53■□□□□ 0.4
SMPDL3A-202ENST00000487215 IGFBPL1Q8WX77 278 aa17.53■□□□□ 0.4
SMPDL3A-202ENST00000487215 VSTM2LQ96N03 204 aa17.53■□□□□ 0.4
SMPDL3A-202ENST00000487215 FAIM2Q9BWQ8 316 aa17.53■□□□□ 0.4
SMPDL3A-202ENST00000487215 VPS11Q9H270 941 aa17.53■□□□□ 0.4
SMPDL3A-202ENST00000487215 UTS2RQ9UKP6 389 aa17.53■□□□□ 0.4
SMPDL3A-202ENST00000487215 TLN2Q9Y4G6 2542 aa17.53■□□□□ 0.4
SMPDL3A-202ENST00000487215 CSPG4Q6UVK1 2322 aa17.53■□□□□ 0.4
SMPDL3A-202ENST00000487215 FBN1P35555 2871 aaKnown RBP17.52■□□□□ 0.4
SMPDL3A-202ENST00000487215 STX16-NPEPL1H3BU86 382 aa17.52■□□□□ 0.4
SMPDL3A-202ENST00000487215 STX16O14662 325 aa17.52■□□□□ 0.4
SMPDL3A-202ENST00000487215 BCAS2O75934 225 aaPredicted RBP17.52■□□□□ 0.4
SMPDL3A-202ENST00000487215 PDYNP01213 254 aa17.52■□□□□ 0.4
SMPDL3A-202ENST00000487215 TYK2P29597 1187 aa17.52■□□□□ 0.4
SMPDL3A-202ENST00000487215 SERPINB8P50452 374 aa17.52■□□□□ 0.4
SMPDL3A-202ENST00000487215 SUCLG1P53597 346 aaKnown RBP17.52■□□□□ 0.4
SMPDL3A-202ENST00000487215 RAET1LQ5VY80 246 aa17.52■□□□□ 0.4
SMPDL3A-202ENST00000487215 FAM219BQ5XKK7 198 aa17.52■□□□□ 0.4
SMPDL3A-202ENST00000487215 ANKRD34AQ69YU3 496 aa17.52■□□□□ 0.4
SMPDL3A-202ENST00000487215 PLEKHM3Q6ZWE6 761 aa17.52■□□□□ 0.4
SMPDL3A-202ENST00000487215 MILR1Q7Z6M3 343 aa17.52■□□□□ 0.4
SMPDL3A-202ENST00000487215 CCDC116Q8IYX3 515 aa17.52■□□□□ 0.4
SMPDL3A-202ENST00000487215 FADS6Q8N9I5 356 aa17.52■□□□□ 0.4
SMPDL3A-202ENST00000487215 ZNF610Q8N9Z0 462 aa17.52■□□□□ 0.4
SMPDL3A-202ENST00000487215 EFHD2Q96C19 240 aaPredicted RBP17.52■□□□□ 0.4
SMPDL3A-202ENST00000487215 PINK1Q9BXM7 581 aa17.52■□□□□ 0.4
SMPDL3A-202ENST00000487215 RNF122Q9H9V4 155 aa17.52■□□□□ 0.4
SMPDL3A-202ENST00000487215 PFDN4Q9NQP4 134 aa17.52■□□□□ 0.4
SMPDL3A-202ENST00000487215 SEC14L5O43304 696 aa17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 SCO2O43819 266 aa17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 TNFRSF21O75509 655 aa17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 PAX1P15863 534 aa17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 PNLIPRP2P54317 469 aa17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 EEFSECP57772 596 aaKnown RBP17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 TRA2BP62995 288 aaKnown RBP17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 GUCY2DQ02846 1103 aa17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 UAP1Q16222 522 aaPredicted RBP17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 ZDHHC24Q6UX98 284 aa17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 RPS27LQ71UM5 84 aaKnown RBP17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 C1orf52Q8N6N3 182 aaKnown RBP17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 OR2M3Q8NG83 312 aa17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 OR4N2Q8NGD1 307 aa17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 OR9A2Q8NGT5 310 aa17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 FNDC9Q8TBE3 224 aa17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 SELENOMQ8WWX9 145 aa17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 KAT2AQ92830 837 aa17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 CAVIN3Q969G5 261 aa17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 ERP27Q96DN0 273 aa17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 DSN1Q9H410 356 aa17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 BRF2Q9HAW0 419 aa17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 FOLH1BQ9HBA9 442 aa17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 PPP4R1LQ9P1A2 415 aa17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 XPR1Q9UBH6 696 aa17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 PYCARDQ9ULZ3 195 aa17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 PROCRQ9UNN8 238 aa17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 ZNF175Q9Y473 711 aa17.51■□□□□ 0.39
SMPDL3A-202ENST00000487215 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.5■□□□□ 0.39
SMPDL3A-202ENST00000487215 PPP6CO00743 305 aa17.5■□□□□ 0.39
SMPDL3A-202ENST00000487215 THBDP07204 575 aa17.5■□□□□ 0.39
SMPDL3A-202ENST00000487215 RPS17P08708 135 aaKnown RBP17.5■□□□□ 0.39
SMPDL3A-202ENST00000487215 CTAGE8P0CG41 777 aa17.5■□□□□ 0.39
SMPDL3A-202ENST00000487215 HK1P19367 917 aa17.5■□□□□ 0.39
SMPDL3A-202ENST00000487215 CASQ1P31415 396 aa17.5■□□□□ 0.39
SMPDL3A-202ENST00000487215 PSPHP78330 225 aa17.5■□□□□ 0.39
SMPDL3A-202ENST00000487215 C2orf54Q08AI8 447 aa17.5■□□□□ 0.39
SMPDL3A-202ENST00000487215 FGFBP1Q14512 234 aa17.5■□□□□ 0.39
SMPDL3A-202ENST00000487215 PON3Q15166 354 aa17.5■□□□□ 0.39
SMPDL3A-202ENST00000487215 GUSBP1Q15486 140 aa17.5■□□□□ 0.39
SMPDL3A-202ENST00000487215 TRADDQ15628 312 aa17.5■□□□□ 0.39
SMPDL3A-202ENST00000487215 ERCC6LQ2NKX8 1250 aa17.5■□□□□ 0.39
SMPDL3A-202ENST00000487215 LETMD1Q6P1Q0 360 aa17.5■□□□□ 0.39
SMPDL3A-202ENST00000487215 CTAGE4Q8IX94 777 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms