RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ENTHD1Q8IYW4 607 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 OR2T33Q8NG76 320 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 NECTIN4Q96NY8 510 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 BRD7Q9NPI1 651 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 SLC2A4RGQ9NR83 387 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 IFT52Q9Y366 437 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 ALPK2Q86TB3 2170 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 TNFRSF21O75509 655 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 RAB36O95755 333 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 ITGAMP11215 1152 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 HOXB3P14651 431 aaPredicted RBP12.45□□□□□ -0.42
HMGN1-216ENST00000486741 RABIFP47224 123 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 BORAQ6PGQ7 559 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 ASB18Q6ZVZ8 466 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 CDH24Q86UP0 819 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 GAL3ST3Q96A11 431 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 COQ8BQ96D53 544 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 SLC41A3Q96GZ6 507 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 ERMAPQ96PL5 475 aaPredicted RBP12.45□□□□□ -0.42
HMGN1-216ENST00000486741 C8orf33Q9H7E9 229 aaPredicted RBP12.45□□□□□ -0.42
HMGN1-216ENST00000486741 ENPP5Q9UJA9 477 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 MRTO4Q9UKD2 239 aaKnown RBP12.45□□□□□ -0.42
HMGN1-216ENST00000486741 A0A1W2PR48 441 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 SAGE2PA6NJ88 616 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 UGT2B7P16662 529 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 GRPRP30550 384 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 SDC2P34741 201 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 CSTF1Q05048 431 aaKnown RBP12.45□□□□□ -0.42
HMGN1-216ENST00000486741 C1orf53Q5VUE5 145 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 KLBQ86Z14 1044 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 LINC00471Q8N535 108 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 FNDC8Q8TC99 324 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 ZNF576Q9H609 170 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 MTHFD2LQ9H903 347 aaPredicted RBP12.45□□□□□ -0.42
HMGN1-216ENST00000486741 MCUBQ9NWR8 336 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 CCL27Q9Y4X3 112 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 PCDHGA10Q9Y5H3 936 aa12.45□□□□□ -0.42
HMGN1-216ENST00000486741 ZFC3H1O60293 1989 aaKnown RBP12.44□□□□□ -0.42
HMGN1-216ENST00000486741 KCNE1BA0A087WTH5 132 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 OR5K4A6NMS3 321 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 YY2O15391 372 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 AKAP8O43823 692 aaKnown RBP12.44□□□□□ -0.42
HMGN1-216ENST00000486741 OR2B3O76000 313 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 UBXN7O94888 489 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 KLHL18O94889 574 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 IGHA2P01877 340 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 ZNF3P17036 446 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 ITIH1P19827 911 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 MTNR1AP48039 350 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 WNT3P56703 355 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 KCNJ10P78508 379 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 SOWAHCQ53LP3 525 aaPredicted RBP12.44□□□□□ -0.42
HMGN1-216ENST00000486741 CEP78Q5JTW2 689 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 MZT2BQ6NZ67 158 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 AKAP14Q86UN6 197 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 CPOQ8IVL8 374 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 SUN5Q8TC36 379 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 ALOXE3Q9BYJ1 711 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 C6orf106Q9H6K1 298 aaPredicted RBP12.44□□□□□ -0.42
HMGN1-216ENST00000486741 PDE7BQ9NP56 450 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 MKL2Q9ULH7 1088 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 SCN3AQ9NY46 2000 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 SH3PXD2BA1X283 911 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 CD8B2A6NJW9 211 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 PRAMEF26H0Y7S4 382 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 SCDO00767 359 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 CEACAM5P06731 702 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 CD8BP10966 210 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 ACVR1BP36896 505 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 TUBA1BP68363 451 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 KIR2DS3Q14952 304 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 KDM4DQ6B0I6 523 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 TMEM53Q6P2H8 277 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 TUBA1AQ71U36 451 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 LAS2Q8IYD9 372 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 PRR22Q8IZ63 422 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 OR13F1Q8NGS4 319 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 CREB3L4Q8TEY5 395 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 UCN3Q969E3 161 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 PCM1Q15154 2024 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 PROS1P07225 676 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 SLC15A1P46059 708 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 RAE1P78406 368 aaKnown RBP12.44□□□□□ -0.42
HMGN1-216ENST00000486741 SCN1BQ07699 218 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 DECR1Q16698 335 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 IGFN1Q86VF2 1251 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 IL17RCQ8NAC3 791 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 OR2A1Q8NGT9 310 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 NEURL3Q96EH8 262 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 MS4A4EQ96PG1 132 aa12.44□□□□□ -0.42
HMGN1-216ENST00000486741 FAM171A2A8MVW0 826 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 GPR89AB7ZAQ6 455 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 KCNJ13O60928 360 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 PTHP01270 115 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 GYPBP06028 91 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 GPR89BP0CG08 455 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 NDUFV2P19404 249 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 TGFBR1P36897 503 aa12.43□□□□□ -0.42
HMGN1-216ENST00000486741 JSRP1Q96MG2 331 aaPredicted RBP12.43□□□□□ -0.42
HMGN1-216ENST00000486741 SERINC2Q96SA4 455 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms