RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 TMEM19Q96HH6 336 aa10.02□□□□□ -0.81
CCDC171-208ENST00000486641 ZDHHC3Q9NYG2 299 aa10.02□□□□□ -0.81
CCDC171-208ENST00000486641 ACAD8Q9UKU7 415 aa10.02□□□□□ -0.81
CCDC171-208ENST00000486641 CLEC4AQ9UMR7 237 aa10.02□□□□□ -0.81
CCDC171-208ENST00000486641 FLVCR2Q9UPI3 526 aa10.02□□□□□ -0.81
CCDC171-208ENST00000486641 ANXA2P2A6NMY6 339 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 AGAP14A8MT82 685 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 K7ERQ8 282 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 SYN3O14994 580 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 RNF13O43567 381 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 SELENOFO60613 162 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 RGS9O75916 674 aaPredicted RBP10.01□□□□□ -0.81
CCDC171-208ENST00000486641 KLHL18O94889 574 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 CBX7O95931 251 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 APOC3P02656 99 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 WNT1P04628 370 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 RPL35P42766 123 aaKnown RBP10.01□□□□□ -0.81
CCDC171-208ENST00000486641 CSNK1DP48730 415 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 ACSM1Q08AH1 577 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 MAP4K2Q12851 820 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 DUSP4Q13115 394 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 NAE1Q13564 534 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 FAM27D1Q5T7N8 215 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 MTFR2Q6P444 385 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 COMTD1Q86VU5 262 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 CMIPQ8IY22 773 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 POGLUT1Q8NBL1 392 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 OR56B4Q8NH76 319 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 CNOT9Q92600 299 aaKnown RBP10.01□□□□□ -0.81
CCDC171-208ENST00000486641 RAB8BQ92930 207 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 WDR89Q96FK6 387 aaPredicted RBP10.01□□□□□ -0.81
CCDC171-208ENST00000486641 ZNF354BQ96LW1 612 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 ZFP3Q96NJ6 502 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 TTYH1Q9H313 450 aaPredicted RBP10.01□□□□□ -0.81
CCDC171-208ENST00000486641 CXorf36Q9H7Y0 433 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 ISG20L2Q9H9L3 353 aaKnown RBP10.01□□□□□ -0.81
CCDC171-208ENST00000486641 IL20Q9NYY1 176 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 KLHL42Q9P2K6 505 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 RPS6KB2Q9UBS0 482 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 CHST2Q9Y4C5 530 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 SIRT4Q9Y6E7 314 aaPredicted RBP10.01□□□□□ -0.81
CCDC171-208ENST00000486641 ZNF106Q9H2Y7 1883 aaKnown RBP10.01□□□□□ -0.81
CCDC171-208ENST00000486641 KDM4EB2RXH2 506 aaPredicted RBP10.01□□□□□ -0.81
CCDC171-208ENST00000486641 M0QZ92 97 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 AIPO00170 330 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 SIGLEC5O15389 551 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 CHST10O43529 356 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 GMDSO60547 372 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 KLKB1P03952 638 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 MPC1LP0DKB6 136 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 C4BPBP20851 252 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 NFYAP23511 347 aaPredicted RBP10.01□□□□□ -0.81
CCDC171-208ENST00000486641 KCNJ5P48544 419 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 SLC11A2P49281 568 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 CDH11P55287 796 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 AP1S2P56377 157 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 SMIM11AP58511 58 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 GPR85P60893 370 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 SIM1P81133 766 aaPredicted RBP10.01□□□□□ -0.81
CCDC171-208ENST00000486641 SIGLEC14Q08ET2 396 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 GPR17Q13304 367 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 CRHR2Q13324 411 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 SNTB2Q13425 540 aaKnown RBP10.01□□□□□ -0.81
CCDC171-208ENST00000486641 PDE7AQ13946 482 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 KIAA1161Q6NSJ0 714 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 C1orf94Q6P1W5 598 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 SMARCD3Q6STE5 483 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 RFLNAQ6ZTI6 216 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 COMMD6Q7Z4G1 85 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 MMP21Q8N119 569 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 TRMT10AQ8TBZ6 339 aaKnown RBP10.01□□□□□ -0.81
CCDC171-208ENST00000486641 C16orf78Q8WTQ4 265 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 THAP4Q8WY91 577 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 C12orf57Q99622 126 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 SPATA5L1Q9BVQ7 753 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 SMG9Q9H0W8 520 aaKnown RBP10.01□□□□□ -0.81
CCDC171-208ENST00000486641 C20orf85Q9H1P6 137 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 SLC35C2Q9NQQ7 365 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 PIPOXQ9P0Z9 390 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 GPR160Q9UJ42 338 aa10.01□□□□□ -0.81
CCDC171-208ENST00000486641 PLXNB3Q9ULL4 1909 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 SLC9B1P1A6NJY1 282 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 FAM74A7A6NL05 159 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 MCRIP1C9JLW8 97 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 M0R3H8 397 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 ABCD4O14678 606 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 SLC16A5O15375 505 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 OAZ2O95190 189 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 URODP06132 367 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 MAOBP27338 520 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 AKR1D1P51857 326 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 TAS2R50P59544 299 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 DHODHQ02127 395 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 HLXQ14774 488 aaPredicted RBP10□□□□□ -0.81
CCDC171-208ENST00000486641 FAM74A3Q4VXF1 159 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 ENTPD8Q5MY95 495 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 HECTD3Q5T447 861 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 SFRP4Q6FHJ7 346 aaPredicted RBP10□□□□□ -0.81
CCDC171-208ENST00000486641 SLC27A4Q6P1M0 643 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 SFXN4Q6P4A7 337 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms