RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 OR9A4Q8NGU2 314 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 GAB3Q8WWW8 586 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 MIR1-1HGQ9H1L0 117 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 AMBNQ9NP70 447 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 CNOT2Q9NZN8 540 aaKnown RBP19.01■□□□□ 0.63
HPS3-206ENST00000486530 ZNF232Q9UNY5 417 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 GPR55Q9Y2T6 319 aaPredicted RBP19.01■□□□□ 0.63
HPS3-206ENST00000486530 COL6A3P12111 3177 aa19■□□□□ 0.63
HPS3-206ENST00000486530 EFCAB10A6NFE3 127 aa19■□□□□ 0.63
HPS3-206ENST00000486530 BCAS1O75363 584 aaPredicted RBP19■□□□□ 0.63
HPS3-206ENST00000486530 THBS1P07996 1170 aa19■□□□□ 0.63
HPS3-206ENST00000486530 CCNYL3P0C7X3 344 aa19■□□□□ 0.63
HPS3-206ENST00000486530 GSTM3P21266 225 aa19■□□□□ 0.63
HPS3-206ENST00000486530 CXCL12P48061 93 aa19■□□□□ 0.63
HPS3-206ENST00000486530 RGS8P57771 180 aaPredicted RBP19■□□□□ 0.63
HPS3-206ENST00000486530 ST3GAL3Q11203 375 aa19■□□□□ 0.63
HPS3-206ENST00000486530 DCTN2Q13561 401 aaKnown RBP19■□□□□ 0.63
HPS3-206ENST00000486530 TRAM2Q15035 370 aa19■□□□□ 0.63
HPS3-206ENST00000486530 EIPR1Q53HC9 387 aa19■□□□□ 0.63
HPS3-206ENST00000486530 ZER1Q7Z7L7 766 aa19■□□□□ 0.63
HPS3-206ENST00000486530 P2RY8Q86VZ1 359 aa19■□□□□ 0.63
HPS3-206ENST00000486530 C17orf82Q86X59 251 aaPredicted RBP19■□□□□ 0.63
HPS3-206ENST00000486530 STX19Q8N4C7 294 aa19■□□□□ 0.63
HPS3-206ENST00000486530 TRUB1Q8WWH5 349 aaKnown RBP19■□□□□ 0.63
HPS3-206ENST00000486530 DIO2Q92813 273 aa19■□□□□ 0.63
HPS3-206ENST00000486530 ANKRD9Q96BM1 317 aaPredicted RBP19■□□□□ 0.63
HPS3-206ENST00000486530 SDF2Q99470 211 aa19■□□□□ 0.63
HPS3-206ENST00000486530 MAP3K3Q99759 626 aa19■□□□□ 0.63
HPS3-206ENST00000486530 ZNF350Q9GZX5 532 aa19■□□□□ 0.63
HPS3-206ENST00000486530 CTPS2Q9NRF8 586 aa19■□□□□ 0.63
HPS3-206ENST00000486530 GPR83Q9NYM4 423 aa19■□□□□ 0.63
HPS3-206ENST00000486530 SLC6A14Q9UN76 642 aa19■□□□□ 0.63
HPS3-206ENST00000486530 GON4LQ3T8J9 2241 aa19■□□□□ 0.63
HPS3-206ENST00000486530 AP3D1O14617 1153 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 AQP9O43315 295 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 CHST10O43529 356 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 CYP7B1O75881 506 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 ZBTB11O95625 1053 aaPredicted RBP18.99■□□□□ 0.63
HPS3-206ENST00000486530 AK1P00568 194 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 TP53P04637 393 aaPredicted RBP18.99■□□□□ 0.63
HPS3-206ENST00000486530 LCKP06239 509 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 C21orf33P30042 268 aaPredicted RBP18.99■□□□□ 0.63
HPS3-206ENST00000486530 IFNGR2P38484 337 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 AVPR1BP47901 424 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 HNRNPKP61978 463 aaKnown RBP eCLIP18.99■□□□□ 0.63
HPS3-206ENST00000486530 MGAT2Q10469 447 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 DUSP8Q13202 625 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 AQP6Q13520 282 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 CASP12Q6UXS9 341 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 SHISA5Q8N114 240 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 SDR16C5Q8N3Y7 309 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 C1orf216Q8TAB5 229 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 CTHRC1Q96CG8 243 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 ITPAQ9BY32 194 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 SLC22A1O15245 554 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 FRS3O43559 492 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 CTSBP07858 339 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 SLC35E2P0CK97 266 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 NXPH1P58417 271 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 COL9A2Q14055 689 aaPredicted RBP18.99■□□□□ 0.63
HPS3-206ENST00000486530 ENTPD8Q5MY95 495 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 TMEM201Q5SNT2 666 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 DCST2Q5T1A1 773 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 ZNF619Q8N2I2 560 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 CLIP4Q8N3C7 705 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 COX18Q8N8Q8 333 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 B3GNT7Q8NFL0 401 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 SPACA7Q96KW9 195 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 HSPA12BQ96MM6 686 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 Q96MT0 163 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 NECTIN3Q9NQS3 549 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 SELENONQ9NZV5 590 aa18.99■□□□□ 0.63
HPS3-206ENST00000486530 BLACEA4D250 179 aa18.98■□□□□ 0.63
HPS3-206ENST00000486530 AGAP5A6NIR3 686 aa18.98■□□□□ 0.63
HPS3-206ENST00000486530 CPSF4LA6NMK7 179 aaKnown RBP18.98■□□□□ 0.63
HPS3-206ENST00000486530 STX11O75558 287 aa18.98■□□□□ 0.63
HPS3-206ENST00000486530 IGFBP1P08833 259 aaPredicted RBP18.98■□□□□ 0.63
HPS3-206ENST00000486530 RNH1P13489 461 aaKnown RBP18.98■□□□□ 0.63
HPS3-206ENST00000486530 BCKDHBP21953 392 aa18.98■□□□□ 0.63
HPS3-206ENST00000486530 ST3GAL4Q11206 333 aa18.98■□□□□ 0.63
HPS3-206ENST00000486530 SPCS2Q15005 226 aa18.98■□□□□ 0.63
HPS3-206ENST00000486530 ZNF836Q6ZNA1 936 aa18.98■□□□□ 0.63
HPS3-206ENST00000486530 PLEKHM3Q6ZWE6 761 aa18.98■□□□□ 0.63
HPS3-206ENST00000486530 C9orf43Q8TAL5 461 aaPredicted RBP18.98■□□□□ 0.63
HPS3-206ENST00000486530 TBC1D15Q8TC07 691 aa18.98■□□□□ 0.63
HPS3-206ENST00000486530 ADAMTS18Q8TE60 1221 aa18.98■□□□□ 0.63
HPS3-206ENST00000486530 SAP130Q9H0E3 1048 aa18.98■□□□□ 0.63
HPS3-206ENST00000486530 SEMA4GQ9NTN9 838 aa18.98■□□□□ 0.63
HPS3-206ENST00000486530 MUTYHQ9UIF7 546 aa18.98■□□□□ 0.63
HPS3-206ENST00000486530 CACNA1IQ9P0X4 2223 aa18.98■□□□□ 0.63
HPS3-206ENST00000486530 A0A087WUU8 490 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 LMO7DNF2Z398 122 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 COQ9O75208 318 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 STSP08842 583 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 PIPP12273 146 aaPredicted RBP18.97■□□□□ 0.63
HPS3-206ENST00000486530 RPS4Y1P22090 263 aaKnown RBP18.97■□□□□ 0.63
HPS3-206ENST00000486530 NR4A1P22736 598 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 ALDH4A1P30038 563 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 MAP3K8P41279 467 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 STT3AP46977 705 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms