RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 SGPP1Q9BX95 441 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 PRRG3Q9BZD7 231 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 GPR62Q9BZJ7 368 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 BTBD1Q9H0C5 482 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 POLR2J3Q9H1A7 115 aaKnown RBP4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 GHITMQ9H3K2 345 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 C11orf49Q9H6J7 331 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 RANBP3Q9H6Z4 567 aaPredicted RBP4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 BRD9Q9H8M2 597 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 HEXA-AS1Q9H8Q6 139 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 SLC28A3Q9HAS3 691 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 GALNT9Q9HCQ5 603 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 NMRK2Q9NPI5 230 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 CYSLTR2Q9NS75 346 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 SLCO1C1Q9NYB5 712 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 TAS2R7Q9NYW3 318 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 NLKQ9UBE8 527 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 AFF4Q9UHB7 1163 aaKnown RBP4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 ING4Q9UNL4 249 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 PRELID1Q9Y255 219 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 YARS2Q9Y2Z4 477 aaKnown RBP4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 SPEF1Q9Y4P9 236 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 NPTNQ9Y639 398 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 U3KQ87 197 aa4.41□□□□□ -1.7
SMARCC1-206ENST00000485737 PLXNB3Q9ULL4 1909 aa4.4□□□□□ -1.7
SMARCC1-206ENST00000485737 TRIP12Q14669 1992 aaPredicted RBP4.4□□□□□ -1.7
SMARCC1-206ENST00000485737 MICAL3Q7RTP6 2002 aa4.4□□□□□ -1.7
SMARCC1-206ENST00000485737 MEIKINA0A087WXM9 373 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 A0A0A6YYJ9 748 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 TRAV19A0A0A6YYK7 116 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 A0A1W2PRB8 838 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 SLC5A10A0PJK1 596 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 ANKRD61A6NGH8 418 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 ISM1B1AKI9 464 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 C5orf58C9J3I9 102 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 H3BN98 237 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 K7ERQ8 282 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 CASKO14936 926 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 NPC1O15118 1278 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 OR10H3O60404 316 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 PLOD3O60568 738 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 HPGDSO60760 199 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 EFCAB14O75071 495 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 NME6O75414 186 aaPredicted RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 SOX14O95416 240 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 OLFM2O95897 454 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 EFEMP2O95967 443 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 DHFRP00374 187 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 IGFBP1P08833 259 aaPredicted RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 RRASP10301 218 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 CTSAP10619 480 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 PEPDP12955 493 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 CYBAP13498 195 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 CD53P19397 219 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 TNNI3P19429 210 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 POU3F3P20264 500 aaPredicted RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 STOMP27105 288 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 CST5P28325 142 aaPredicted RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 HOXD10P28358 340 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 SOAT1P35610 550 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 FEN1P39748 380 aaKnown RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 FRKP42685 505 aaPredicted RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 SLC1A3P43003 542 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 RFX3P48380 749 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 GIPRP48546 466 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 SPINT3P49223 89 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 TUFMP49411 452 aaKnown RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 SMSP52788 366 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 ACLYP53396 1101 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 SNRPD2P62316 118 aaKnown RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 FKBP1BP68106 108 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 DHODHQ02127 395 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 HSF2Q03933 536 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 MAP4K2Q12851 820 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 ZNF155Q12901 538 aaPredicted RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 DUSP4Q13115 394 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 NAE1Q13564 534 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 CDH18Q13634 790 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 DDX39BQ13838 428 aaKnown RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 GPR176Q14439 515 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 GINS1Q14691 196 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 MLC1Q15049 377 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 P2RY14Q15391 338 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 FCN2Q15485 313 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 SF1Q15637 639 aaKnown RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 PRSS53Q2L4Q9 553 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 GAB4Q2WGN9 574 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 ZNF658BQ4V348 819 aaPredicted RBP4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 EOGTQ5NDL2 527 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 RTP2Q5QGT7 225 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 FAM205BPQ63HN1 556 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 HBMQ6B0K9 141 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 VASNQ6EMK4 673 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 ADNP2Q6IQ32 1131 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 C1orf94Q6P1W5 598 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 FUT10Q6P4F1 479 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 BHLHB9Q6PI77 547 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 TMEM65Q6PI78 240 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 CXCL17Q6UXB2 119 aa4.4□□□□□ -1.71
SMARCC1-206ENST00000485737 SERPINA13PQ6UXR4 307 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms