RNA–Protein interactions for RNA: ENST00000485158.1

NUP188-206, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 392 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-206ENST00000485158 ZSCAN12O43309 604 aa12.34□□□□□ -0.43
NUP188-206ENST00000485158 REM1O75628 298 aa12.34□□□□□ -0.43
NUP188-206ENST00000485158 THBDP07204 575 aa12.34□□□□□ -0.43
NUP188-206ENST00000485158 PCSK2P16519 638 aa12.34□□□□□ -0.43
NUP188-206ENST00000485158 TBXA2RP21731 343 aa12.34□□□□□ -0.43
NUP188-206ENST00000485158 STX2P32856 288 aa12.34□□□□□ -0.43
NUP188-206ENST00000485158 DEKP35659 375 aaKnown RBP12.34□□□□□ -0.43
NUP188-206ENST00000485158 SUCLG1P53597 346 aaKnown RBP12.34□□□□□ -0.43
NUP188-206ENST00000485158 TRA2BP62995 288 aaKnown RBP12.34□□□□□ -0.43
NUP188-206ENST00000485158 MRPS35P82673 323 aaKnown RBP12.34□□□□□ -0.43
NUP188-206ENST00000485158 TRAF3Q13114 568 aa12.34□□□□□ -0.43
NUP188-206ENST00000485158 CALCOCO2Q13137 446 aa12.34□□□□□ -0.43
NUP188-206ENST00000485158 GANABQ14697 944 aaKnown RBP12.34□□□□□ -0.43
NUP188-206ENST00000485158 LTB4RQ15722 352 aa12.34□□□□□ -0.43
NUP188-206ENST00000485158 OR5M10Q6IEU7 315 aa12.34□□□□□ -0.43
NUP188-206ENST00000485158 ZNF550Q7Z398 422 aa12.34□□□□□ -0.43
NUP188-206ENST00000485158 ZNF611Q8N823 705 aa12.34□□□□□ -0.43
NUP188-206ENST00000485158 ZNF610Q8N9Z0 462 aa12.34□□□□□ -0.43
NUP188-206ENST00000485158 ERP44Q9BS26 406 aa12.34□□□□□ -0.43
NUP188-206ENST00000485158 CXorf56Q9H5V9 222 aa12.34□□□□□ -0.43
NUP188-206ENST00000485158 BRF2Q9HAW0 419 aa12.34□□□□□ -0.43
NUP188-206ENST00000485158 ZBTB26Q9HCK0 441 aa12.34□□□□□ -0.43
NUP188-206ENST00000485158 PLSCR4Q9NRQ2 329 aa12.34□□□□□ -0.43
NUP188-206ENST00000485158 GRHL1Q9NZI5 618 aa12.34□□□□□ -0.43
NUP188-206ENST00000485158 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.33□□□□□ -0.44
NUP188-206ENST00000485158 ERAL1O75616 437 aaKnown RBP12.33□□□□□ -0.44
NUP188-206ENST00000485158 IL11P20809 199 aa12.33□□□□□ -0.44
NUP188-206ENST00000485158 NR1H2P55055 460 aa12.33□□□□□ -0.44
NUP188-206ENST00000485158 CORO7P57737 925 aa12.33□□□□□ -0.44
NUP188-206ENST00000485158 FAM214BQ7L5A3 538 aa12.33□□□□□ -0.44
NUP188-206ENST00000485158 METTL25Q8N6Q8 603 aa12.33□□□□□ -0.44
NUP188-206ENST00000485158 OR2M3Q8NG83 312 aa12.33□□□□□ -0.44
NUP188-206ENST00000485158 FNDC9Q8TBE3 224 aa12.33□□□□□ -0.44
NUP188-206ENST00000485158 TMEM171Q8WVE6 324 aa12.33□□□□□ -0.44
NUP188-206ENST00000485158 KLHL29Q96CT2 875 aa12.33□□□□□ -0.44
NUP188-206ENST00000485158 OR10A4Q9H209 315 aa12.33□□□□□ -0.44
NUP188-206ENST00000485158 RNF14Q9UBS8 474 aa12.33□□□□□ -0.44
NUP188-206ENST00000485158 PCTPQ9UKL6 214 aa12.33□□□□□ -0.44
NUP188-206ENST00000485158 ZNF337Q9Y3M9 751 aa12.33□□□□□ -0.44
NUP188-206ENST00000485158 SAR1BQ9Y6B6 198 aa12.33□□□□□ -0.44
NUP188-206ENST00000485158 ZNF780BQ9Y6R6 833 aa12.33□□□□□ -0.44
NUP188-206ENST00000485158 FAM187AA6NFU0 413 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 H0YC42 278 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 STX16-NPEPL1H3BU86 382 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 STX16O14662 325 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 HS3ST1O14792 307 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 PLOD3O60568 738 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 ALDOAP04075 364 aaKnown RBP12.32□□□□□ -0.44
NUP188-206ENST00000485158 CTAGE8P0CG41 777 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 KCNJ5P48544 419 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 CCNG1P51959 295 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 TPD52P55327 224 aaPredicted RBP12.32□□□□□ -0.44
NUP188-206ENST00000485158 SIRPAP78324 504 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 MRPS22P82650 360 aaKnown RBP12.32□□□□□ -0.44
NUP188-206ENST00000485158 GUCY2DQ02846 1103 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 IFT88Q13099 833 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 TNK1Q13470 666 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 ETFDHQ16134 617 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 GLYR1Q49A26 553 aaPredicted RBP12.32□□□□□ -0.44
NUP188-206ENST00000485158 TECRLQ5HYJ1 363 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 ADAM5Q6NVV9 412 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 KLC3Q6P597 504 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 NPSR1Q6W5P4 371 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 ZNF704Q6ZNC4 412 aaPredicted RBP12.32□□□□□ -0.44
NUP188-206ENST00000485158 LARP4Q71RC2 724 aaKnown RBP eCLIP12.32□□□□□ -0.44
NUP188-206ENST00000485158 CTAGE4Q8IX94 777 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 UBQLNLQ8IYU4 475 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 SAMD14Q8IZD0 417 aaPredicted RBP12.32□□□□□ -0.44
NUP188-206ENST00000485158 FBF1Q8TES7 1133 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 ATP6V1E2Q96A05 226 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 ZC3HAV1LQ96H79 300 aaKnown RBP12.32□□□□□ -0.44
NUP188-206ENST00000485158 FAIM2Q9BWQ8 316 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 PINK1Q9BXM7 581 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 PROCRQ9UNN8 238 aa12.32□□□□□ -0.44
NUP188-206ENST00000485158 A0A096LPK6 155 aa12.31□□□□□ -0.44
NUP188-206ENST00000485158 OVOL3O00110 214 aa12.31□□□□□ -0.44
NUP188-206ENST00000485158 FADS1O60427 444 aa12.31□□□□□ -0.44
NUP188-206ENST00000485158 THBS1P07996 1170 aa12.31□□□□□ -0.44
NUP188-206ENST00000485158 FCGR2AP12318 317 aa12.31□□□□□ -0.44
NUP188-206ENST00000485158 IL12BP29460 328 aa12.31□□□□□ -0.44
NUP188-206ENST00000485158 EVI2BP34910 448 aa12.31□□□□□ -0.44
NUP188-206ENST00000485158 KRT20P35900 424 aa12.31□□□□□ -0.44
NUP188-206ENST00000485158 ATP5J2P56134 94 aa12.31□□□□□ -0.44
NUP188-206ENST00000485158 PSG6Q00889 435 aa12.31□□□□□ -0.44
NUP188-206ENST00000485158 DMTNQ08495 405 aa12.31□□□□□ -0.44
NUP188-206ENST00000485158 PON3Q15166 354 aa12.31□□□□□ -0.44
NUP188-206ENST00000485158 TMEM44Q2T9K0 475 aa12.31□□□□□ -0.44
NUP188-206ENST00000485158 MROH9Q5TGP6 573 aa12.31□□□□□ -0.44
NUP188-206ENST00000485158 TTC19Q6DKK2 380 aaPredicted RBP12.31□□□□□ -0.44
NUP188-206ENST00000485158 FAM180BQ6P0A1 224 aa12.31□□□□□ -0.44
NUP188-206ENST00000485158 STAC2Q6ZMT1 411 aa12.31□□□□□ -0.44
NUP188-206ENST00000485158 PTGR2Q8N8N7 351 aaPredicted RBP12.31□□□□□ -0.44
NUP188-206ENST00000485158 OR4K17Q8NGC6 315 aa12.31□□□□□ -0.44
NUP188-206ENST00000485158 NSUN5Q96P11 429 aaKnown RBP12.31□□□□□ -0.44
NUP188-206ENST00000485158 DSN1Q9H410 356 aa12.31□□□□□ -0.44
NUP188-206ENST00000485158 ELOVL6Q9H5J4 265 aa12.31□□□□□ -0.44
NUP188-206ENST00000485158 FARSBQ9NSD9 589 aaKnown RBP12.31□□□□□ -0.44
NUP188-206ENST00000485158 PPP4R1LQ9P1A2 415 aa12.31□□□□□ -0.44
NUP188-206ENST00000485158 CPSF2Q9P2I0 782 aaKnown RBP12.31□□□□□ -0.44
NUP188-206ENST00000485158 UTS2RQ9UKP6 389 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms