RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 C2orf72A6NCS6 295 aa17.52■□□□□ 0.4
SNX17-206ENST00000484886 NPIPA2E9PIF3 369 aa17.52■□□□□ 0.4
SNX17-206ENST00000484886 NPIPA3F8WFD2 350 aa17.52■□□□□ 0.4
SNX17-206ENST00000484886 KLF11O14901 512 aa17.52■□□□□ 0.4
SNX17-206ENST00000484886 ZG16O60844 167 aa17.52■□□□□ 0.4
SNX17-206ENST00000484886 TRAPPC6AO75865 159 aa17.52■□□□□ 0.4
SNX17-206ENST00000484886 C6orf47O95873 294 aa17.52■□□□□ 0.4
SNX17-206ENST00000484886 EPHA3P29320 983 aa17.52■□□□□ 0.4
SNX17-206ENST00000484886 MAN2A2P49641 1150 aa17.52■□□□□ 0.4
SNX17-206ENST00000484886 PNLIPRP2P54317 469 aa17.52■□□□□ 0.4
SNX17-206ENST00000484886 NME5P56597 212 aa17.52■□□□□ 0.4
SNX17-206ENST00000484886 CYP27C1Q4G0S4 372 aa17.52■□□□□ 0.4
SNX17-206ENST00000484886 MTFR2Q6P444 385 aa17.52■□□□□ 0.4
SNX17-206ENST00000484886 C3P1Q6ZMU1 363 aa17.52■□□□□ 0.4
SNX17-206ENST00000484886 Q6ZPB1 254 aaPredicted RBP17.52■□□□□ 0.4
SNX17-206ENST00000484886 CHERPQ8IWX8 916 aaKnown RBP17.52■□□□□ 0.4
SNX17-206ENST00000484886 RIMKLAQ8IXN7 391 aa17.52■□□□□ 0.4
SNX17-206ENST00000484886 LRRC34Q8IZ02 419 aa17.52■□□□□ 0.4
SNX17-206ENST00000484886 OR1J4Q8NGS1 313 aa17.52■□□□□ 0.4
SNX17-206ENST00000484886 FAM57AQ8TBR7 257 aa17.52■□□□□ 0.4
SNX17-206ENST00000484886 OR5P2Q8WZ92 322 aa17.52■□□□□ 0.4
SNX17-206ENST00000484886 COQ8BQ96D53 544 aa17.52■□□□□ 0.4
SNX17-206ENST00000484886 TMEM41AQ96HV5 264 aa17.52■□□□□ 0.4
SNX17-206ENST00000484886 LMF2Q9BU23 707 aaKnown RBP17.52■□□□□ 0.4
SNX17-206ENST00000484886 ACBD3Q9H3P7 528 aa17.52■□□□□ 0.4
SNX17-206ENST00000484886 WDR55Q9H6Y2 383 aaPredicted RBP17.52■□□□□ 0.4
SNX17-206ENST00000484886 PLSCR2Q9NRY7 297 aa17.52■□□□□ 0.4
SNX17-206ENST00000484886 ZCCHC3Q9NUD5 404 aaKnown RBP17.52■□□□□ 0.4
SNX17-206ENST00000484886 GTF3C1Q12789 2109 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 ZNF407Q9C0G0 2248 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 TRGV5A0A0B4J1U4 118 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 TTC36A6NLP5 189 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 TSPAN2O60636 221 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 ICOSLGO75144 302 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 KCNH1O95259 989 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 SOAT1P35610 550 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 TRPC1P48995 793 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 PSMD4P55036 377 aaKnown RBP17.51■□□□□ 0.39
SNX17-206ENST00000484886 C21orf58P58505 322 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 PPP2R2AP63151 447 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 PTPN13Q12923 2485 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 SNTA1Q13424 505 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 GAB1Q13480 694 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 MLC1Q15049 377 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 OR4F3Q6IEY1 312 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 TRILQ7L0X0 811 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 EID3Q8N140 333 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 CDRT4Q8N9R6 151 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 FAM120BQ96EK7 910 aaKnown RBP17.51■□□□□ 0.39
SNX17-206ENST00000484886 RMND5BQ96G75 393 aaPredicted RBP17.51■□□□□ 0.39
SNX17-206ENST00000484886 GNRHR2Q96P88 292 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 YIPF4Q9BSR8 244 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 INTS9Q9NV88 658 aaKnown RBP17.51■□□□□ 0.39
SNX17-206ENST00000484886 QPCTLQ9NXS2 382 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 C15orf41Q9Y2V0 281 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 HECTD1Q9ULT8 2610 aa17.51■□□□□ 0.39
SNX17-206ENST00000484886 MYO7BQ6PIF6 2116 aa17.5■□□□□ 0.39
SNX17-206ENST00000484886 GXYLT2A0PJZ3 443 aa17.5■□□□□ 0.39
SNX17-206ENST00000484886 SASH3O75995 380 aa17.5■□□□□ 0.39
SNX17-206ENST00000484886 IGHG3P01860 377 aa17.5■□□□□ 0.39
SNX17-206ENST00000484886 CYP4B1P13584 511 aa17.5■□□□□ 0.39
SNX17-206ENST00000484886 ELAVL4P26378 380 aaKnown RBP17.5■□□□□ 0.39
SNX17-206ENST00000484886 CCT3P49368 545 aaKnown RBP17.5■□□□□ 0.39
SNX17-206ENST00000484886 PRIM2P49643 509 aa17.5■□□□□ 0.39
SNX17-206ENST00000484886 CLNS1AP54105 237 aaKnown RBP17.5■□□□□ 0.39
SNX17-206ENST00000484886 TP53BP2Q13625 1128 aa17.5■□□□□ 0.39
SNX17-206ENST00000484886 TIGD3Q6B0B8 471 aa17.5■□□□□ 0.39
SNX17-206ENST00000484886 OGFOD2Q6N063 350 aa17.5■□□□□ 0.39
SNX17-206ENST00000484886 TMEM81Q6P7N7 255 aa17.5■□□□□ 0.39
SNX17-206ENST00000484886 SPATA19Q7Z5L4 167 aa17.5■□□□□ 0.39
SNX17-206ENST00000484886 DOLPP1Q86YN1 238 aa17.5■□□□□ 0.39
SNX17-206ENST00000484886 OR56A1Q8NGH5 318 aa17.5■□□□□ 0.39
SNX17-206ENST00000484886 OR5M9Q8NGP3 310 aa17.5■□□□□ 0.39
SNX17-206ENST00000484886 PIWIL2Q8TC59 973 aaKnown RBP17.5■□□□□ 0.39
SNX17-206ENST00000484886 PIK3R3Q92569 461 aa17.5■□□□□ 0.39
SNX17-206ENST00000484886 OTUB1Q96FW1 271 aaPredicted RBP17.5■□□□□ 0.39
SNX17-206ENST00000484886 C16orf58Q96GQ5 468 aa17.5■□□□□ 0.39
SNX17-206ENST00000484886 CCDC120Q96HB5 630 aa17.5■□□□□ 0.39
SNX17-206ENST00000484886 PSMG3-AS1Q96PY0 264 aa17.5■□□□□ 0.39
SNX17-206ENST00000484886 SLC6A15Q9H2J7 730 aa17.5■□□□□ 0.39
SNX17-206ENST00000484886 NEUROD4Q9HD90 331 aa17.5■□□□□ 0.39
SNX17-206ENST00000484886 SIRT3Q9NTG7 399 aaPredicted RBP17.5■□□□□ 0.39
SNX17-206ENST00000484886 TNFRSF10DQ9UBN6 386 aa17.5■□□□□ 0.39
SNX17-206ENST00000484886 ACAD8Q9UKU7 415 aa17.5■□□□□ 0.39
SNX17-206ENST00000484886 NCKAP5O14513 1909 aa17.5■□□□□ 0.39
SNX17-206ENST00000484886 FLNBO75369 2602 aaKnown RBP17.49■□□□□ 0.39
SNX17-206ENST00000484886 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.49■□□□□ 0.39
SNX17-206ENST00000484886 WIPF3A6NGB9 483 aa17.49■□□□□ 0.39
SNX17-206ENST00000484886 SNPHO15079 494 aa17.49■□□□□ 0.39
SNX17-206ENST00000484886 SCO2O43819 266 aa17.49■□□□□ 0.39
SNX17-206ENST00000484886 SUSD5O60279 629 aa17.49■□□□□ 0.39
SNX17-206ENST00000484886 HCN1O60741 890 aa17.49■□□□□ 0.39
SNX17-206ENST00000484886 DIAPH2O60879 1101 aa17.49■□□□□ 0.39
SNX17-206ENST00000484886 ALOX5P09917 674 aa17.49■□□□□ 0.39
SNX17-206ENST00000484886 ACP2P11117 423 aa17.49■□□□□ 0.39
SNX17-206ENST00000484886 KIR3DL1P43629 444 aa17.49■□□□□ 0.39
SNX17-206ENST00000484886 FNDC7Q5VTL7 733 aa17.49■□□□□ 0.39
SNX17-206ENST00000484886 MFSD12Q6NUT3 480 aa17.49■□□□□ 0.39
SNX17-206ENST00000484886 CAMKMTQ7Z624 323 aa17.49■□□□□ 0.39
SNX17-206ENST00000484886 COX18Q8N8Q8 333 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms