RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 RNF138Q8WVD3 245 aa8.57□□□□□ -1.04
NUP50-215ENST00000484186 NRGNQ92686 78 aa8.57□□□□□ -1.04
NUP50-215ENST00000484186 EFHD2Q96C19 240 aaPredicted RBP8.57□□□□□ -1.04
NUP50-215ENST00000484186 UCN2Q96RP3 112 aa8.57□□□□□ -1.04
NUP50-215ENST00000484186 TUBA1CQ9BQE3 449 aa8.57□□□□□ -1.04
NUP50-215ENST00000484186 POLDIP3Q9BY77 421 aaKnown RBP8.57□□□□□ -1.04
NUP50-215ENST00000484186 PPCSQ9HAB8 311 aa8.57□□□□□ -1.04
NUP50-215ENST00000484186 MYNNQ9NPC7 610 aa8.57□□□□□ -1.04
NUP50-215ENST00000484186 MIEF1Q9NQG6 463 aa8.57□□□□□ -1.04
NUP50-215ENST00000484186 RRAGDQ9NQL2 400 aaPredicted RBP8.57□□□□□ -1.04
NUP50-215ENST00000484186 RASSF1Q9NS23 344 aa8.57□□□□□ -1.04
NUP50-215ENST00000484186 OXSMQ9NWU1 459 aa8.57□□□□□ -1.04
NUP50-215ENST00000484186 JKAMPQ9P055 326 aa8.57□□□□□ -1.04
NUP50-215ENST00000484186 FBXL2Q9UKC9 423 aa8.57□□□□□ -1.04
NUP50-215ENST00000484186 OR10H1Q9Y4A9 318 aa8.57□□□□□ -1.04
NUP50-215ENST00000484186 POLR3HQ9Y535 204 aaPredicted RBP8.57□□□□□ -1.04
NUP50-215ENST00000484186 TACC2O95359 2948 aa8.57□□□□□ -1.04
NUP50-215ENST00000484186 TEP1Q99973 2627 aaKnown RBP8.56□□□□□ -1.04
NUP50-215ENST00000484186 F8P00451 2351 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 A6NNC1 897 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 H0Y3Z8 333 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 PLOD2O00469 737 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 ZIC3O60481 467 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 RCBTB2O95199 551 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 TMIGD3P0DMS9 266 aaPredicted RBP8.56□□□□□ -1.04
NUP50-215ENST00000484186 UROSP10746 265 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 CPA3P15088 417 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 CHMP24386 653 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 GRK2P25098 689 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 NTSP30990 170 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 MC3RP41968 323 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 STARP49675 285 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 DGKQP52824 942 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 ART1P52961 327 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 IST1P53990 364 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 PSG6Q00889 435 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 ZNF155Q12901 538 aaPredicted RBP8.56□□□□□ -1.04
NUP50-215ENST00000484186 GAB1Q13480 694 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 DAZAP2Q15038 168 aaPredicted RBP8.56□□□□□ -1.04
NUP50-215ENST00000484186 CYP27C1Q4G0S4 372 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 SH2D4BQ5SQS7 431 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 NOXRED1Q6NXP6 359 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 TMEM107Q6UX40 140 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 KIF18BQ86Y91 864 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 CCDC63Q8NA47 563 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 GOT1L1Q8NHS2 421 aaPredicted RBP8.56□□□□□ -1.04
NUP50-215ENST00000484186 UBLCP1Q8WVY7 318 aaPredicted RBP8.56□□□□□ -1.04
NUP50-215ENST00000484186 NINJ1Q92982 152 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 WNT2BQ93097 391 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 METTL2AQ96IZ6 378 aaKnown RBP8.56□□□□□ -1.04
NUP50-215ENST00000484186 SFXN2Q96NB2 322 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 TM9SF2Q99805 663 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 GPATCH1Q9BRR8 931 aaKnown RBP8.56□□□□□ -1.04
NUP50-215ENST00000484186 CLEC4MQ9H2X3 399 aaPredicted RBP8.56□□□□□ -1.04
NUP50-215ENST00000484186 C12orf65Q9H3J6 166 aaKnown RBP8.56□□□□□ -1.04
NUP50-215ENST00000484186 GLIPR2Q9H4G4 154 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 TNFRSF12AQ9NP84 129 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 CBLCQ9ULV8 474 aa8.56□□□□□ -1.04
NUP50-215ENST00000484186 C19orf53Q9UNZ5 99 aaPredicted RBP8.56□□□□□ -1.04
NUP50-215ENST00000484186 SPG11Q96JI7 2443 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 KIAA1549Q9HCM3 1950 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 TUBAL3A6NHL2 446 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 SMIM23A6NLE4 172 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 CLCA1A8K7I4 914 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 EEF1E1-BLOC1S5C9J1V9 151 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 NPIPB8E9PQR5 432 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 UPK1AO00322 258 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 SLC28A1O00337 649 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 COPEO14579 308 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 EEF1E1O43324 174 aaKnown RBP8.55□□□□□ -1.04
NUP50-215ENST00000484186 FADS1O60427 444 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 SEC22BO75396 215 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 PSMG1O95456 288 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 EPXP11678 715 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 ZNF708P17019 499 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 PRPH2P23942 346 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 TACR1P25103 407 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 DPP4P27487 766 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 EVI2BP34910 448 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 LHX2P50458 406 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 DSCR4P56555 118 aaPredicted RBP8.55□□□□□ -1.04
NUP50-215ENST00000484186 CLDN18P56856 261 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 SORDQ00796 357 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 SLC18A2Q05940 514 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 FOXF2Q12947 444 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 KIAA0040Q15053 153 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 ZNHIT3Q15649 155 aaPredicted RBP8.55□□□□□ -1.04
NUP50-215ENST00000484186 BCL2A1Q16548 175 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 DECR1Q16698 335 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 LIPMQ5VYY2 423 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 IKBIPQ70UQ0 350 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 OR2L13Q8N349 312 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 LRRN4CLQ8ND94 238 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 OR4K17Q8NGC6 315 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 LINC01560Q8TB33 94 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 INTS12Q96CB8 462 aaKnown RBP8.55□□□□□ -1.04
NUP50-215ENST00000484186 ELP4Q96EB1 424 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 EGLN2Q96KS0 407 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 ZFP3Q96NJ6 502 aa8.55□□□□□ -1.04
NUP50-215ENST00000484186 AMDHD1Q96NU7 426 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms