RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 RGS14O43566 566 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 XPNPEP2O43895 674 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 GLRA3O75311 464 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 NXPH2O95156 264 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 H6PDO95479 791 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 FGF19O95750 216 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 CCNB1P14635 433 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 H2AFXP16104 143 aaPredicted RBP3.94□□□□□ -1.78
PTCD3-214ENST00000483925 NCK1P16333 377 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 PTNP21246 168 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 TBXA2RP21731 343 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 EPHA2P29317 976 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 CRYBB2P43320 205 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 GYG1P46976 350 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 CASP4P49662 377 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 CSNK1EP49674 416 aaKnown RBP3.94□□□□□ -1.78
PTCD3-214ENST00000483925 BCAP31P51572 246 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 SLC8A3P57103 927 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 B3GALT5-AS1P59052 145 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 OGDHQ02218 1023 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 BDH1Q02338 343 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 ZP4Q12836 540 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 TRAF2Q12933 501 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 FHL1Q13642 323 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 TFDP1Q14186 410 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 CRMP1Q14194 572 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 SF3B4Q15427 424 aaKnown RBP eCLIP3.94□□□□□ -1.782e-6■■■□□ 16.4
PTCD3-214ENST00000483925 TGFBIQ15582 683 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 SNAI3Q3KNW1 292 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 DCAF10Q5QP82 559 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 BEND6Q5SZJ8 279 aaPredicted RBP3.94□□□□□ -1.78
PTCD3-214ENST00000483925 OR4C11Q6IEV9 310 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 SLC18B1Q6NT16 456 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 LEG1Q6P5S2 330 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 BHLHB9Q6PI77 547 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 H2BFWTQ7Z2G1 175 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 ANKRD37Q7Z713 158 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 SCD5Q86SK9 330 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 LINC00523Q86TU6 105 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 TMEM219Q86XT9 240 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 SPEM1Q8N4L4 309 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 DNAJC22Q8N4W6 341 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 TMEM199Q8N511 208 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 RBMXL3Q8N7X1 1067 aaKnown RBP3.94□□□□□ -1.78
PTCD3-214ENST00000483925 OR1F12Q8NHA8 337 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 ELMO1Q92556 727 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 SLCO2A1Q92959 643 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 KIAA1143Q96AT1 154 aaPredicted RBP3.94□□□□□ -1.78
PTCD3-214ENST00000483925 C10orf35Q96D05 121 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 PELI1Q96FA3 418 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 LURAP1Q96LR2 239 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 DUX5Q96PT3 197 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 FUCA2Q9BTY2 467 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 PINK1Q9BXM7 581 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 QTRT1Q9BXR0 403 aaKnown RBP3.94□□□□□ -1.78
PTCD3-214ENST00000483925 ANKRD60Q9BZ19 345 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 IL22Q9GZX6 179 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 LRRN3Q9H3W5 708 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 PELI2Q9HAT8 420 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 UBE2TQ9NPD8 197 aaPredicted RBP3.94□□□□□ -1.78
PTCD3-214ENST00000483925 C20orf96Q9NUD7 363 aaPredicted RBP3.94□□□□□ -1.78
PTCD3-214ENST00000483925 TUBA8Q9NY65 449 aaPredicted RBP3.94□□□□□ -1.78
PTCD3-214ENST00000483925 CHMP5Q9NZZ3 219 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.94□□□□□ -1.78
PTCD3-214ENST00000483925 TUBGCP4Q9UGJ1 667 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 ANGPTL2Q9UKU9 493 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 POMT2Q9UKY4 750 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 EIF3LQ9Y262 564 aaKnown RBP3.94□□□□□ -1.78
PTCD3-214ENST00000483925 VDAC3Q9Y277 283 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 ZHX2Q9Y6X8 837 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 TRBV11-1A0A0K0K1C0 115 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 A0A1W2PPI3 338 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 LOC390937A0A1W2PQ73 354 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 OR6C75A6NL08 312 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 H3BMH7 237 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 OR7A17O14581 309 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 ANXA9O76027 345 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 CLDN9O95484 217 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 SNAI1O95863 264 aaPredicted RBP3.93□□□□□ -1.78
PTCD3-214ENST00000483925 SYF2O95926 243 aaKnown RBP3.93□□□□□ -1.78
PTCD3-214ENST00000483925 CST1P01037 141 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 MBP02144 154 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 LINC00271P0C7V0 271 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 ANXA3P12429 323 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 ITGA2P17301 1181 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 MAT2AP31153 395 aaKnown RBP3.93□□□□□ -1.78
PTCD3-214ENST00000483925 RPS5P46782 204 aaKnown RBP3.93□□□□□ -1.78
PTCD3-214ENST00000483925 FHITP49789 147 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 DAOAP59103 153 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 RAB11AP62491 216 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 SLC20A2Q08357 652 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 TRAF3Q13114 568 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 GPS2Q13227 327 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 KIR2DS3Q14952 304 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 DAZAP2Q15038 168 aaPredicted RBP3.93□□□□□ -1.78
PTCD3-214ENST00000483925 RAB11BQ15907 218 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 MICBQ29980 383 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 ALKBH6Q3KRA9 238 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 SBK1Q52WX2 424 aa3.93□□□□□ -1.78
PTCD3-214ENST00000483925 SLC25A53Q5H9E4 307 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms