RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 FAM20BO75063 409 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 COQ9O75208 318 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 TRMUO75648 421 aaKnown RBP12.34□□□□□ -0.43
CPNE1-225ENST00000483495 S1PR1P21453 382 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 ALDH4A1P30038 563 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 GPR3P46089 330 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 UGT2B15P54855 530 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 ALDH6A1Q02252 535 aaKnown RBP12.34□□□□□ -0.43
CPNE1-225ENST00000483495 EMX1Q04741 257 aaPredicted RBP12.34□□□□□ -0.43
CPNE1-225ENST00000483495 COX10Q12887 443 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 DCST2Q5T1A1 773 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 NKAIN2Q5VXU1 208 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 DGAT2L6Q6ZPD8 337 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 PRSS48Q7RTY5 328 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 P3H2Q8IVL5 708 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 CCDC103Q8IW40 242 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 VWA5B2Q8N398 1253 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 ZNF540Q8NDQ6 660 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 DIO2Q92813 273 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 ANKRD19PQ9H560 264 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 FKBP14Q9NWM8 211 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 SOHLH2Q9NX45 425 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 HCN3Q9P1Z3 774 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 SPAG17Q6Q759 2223 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 CACNA1IQ9P0X4 2223 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 TGFBR3LH3BV60 316 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 OR10H2O60403 315 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 STX11O75558 287 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 NKX2-2O95096 273 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 GUSBP08236 651 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 GLB1P16278 677 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 ACVR2AP27037 513 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 IDH2P48735 452 aaKnown RBP12.34□□□□□ -0.43
CPNE1-225ENST00000483495 TMBIM6P55061 237 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 CDC42P60953 191 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 EEF1A1P68104 462 aaKnown RBP12.34□□□□□ -0.43
CPNE1-225ENST00000483495 ROR2Q01974 943 aaKnown RBP12.34□□□□□ -0.43
CPNE1-225ENST00000483495 BNIP3Q12983 259 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 EXOSC7Q15024 291 aaKnown RBP12.34□□□□□ -0.43
CPNE1-225ENST00000483495 LARS2Q15031 903 aaKnown RBP12.34□□□□□ -0.43
CPNE1-225ENST00000483495 SHBQ15464 509 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 GPR107Q5VW38 600 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 C1orf94Q6P1W5 598 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 GALNT12Q8IXK2 581 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 SLC35F3Q8IY50 421 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 ZNF619Q8N2I2 560 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 CLIP4Q8N3C7 705 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 DOK4Q8TEW6 326 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 FAR1Q8WVX9 515 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 C12orf43Q96C57 262 aaKnown RBP12.34□□□□□ -0.43
CPNE1-225ENST00000483495 PEX11GQ96HA9 241 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 MPP4Q96JB8 637 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 POLE3Q9NRF9 147 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 ZNF232Q9UNY5 417 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 CLDN4O14493 209 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 RGS10O43665 173 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 KIAA0513O60268 411 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 MPZL2O60487 215 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 CYP7B1O75881 506 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 TP53P04637 393 aaPredicted RBP12.33□□□□□ -0.44
CPNE1-225ENST00000483495 AVPR1BP47901 424 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 GSSP48637 474 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 OR1D5P58170 312 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 GPLD1P80108 840 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 BNC1Q01954 994 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 MVKQ03426 396 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 CFHR1Q03591 330 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 TARDBPQ13148 414 aaKnown RBP eCLIP12.33□□□□□ -0.44
CPNE1-225ENST00000483495 SLC13A2Q13183 592 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 GRM7Q14831 915 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 EIPR1Q53HC9 387 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 CCNJQ5T5M9 372 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 ZNF836Q6ZNA1 936 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 MED25Q71SY5 747 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 ZER1Q7Z7L7 766 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 COX18Q8N8Q8 333 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 OR4K5Q8NGD3 323 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 OR52R1Q8NGF1 315 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 AHCYL2Q96HN2 611 aaKnown RBP12.33□□□□□ -0.44
CPNE1-225ENST00000483495 ELF4Q99607 663 aaPredicted RBP12.33□□□□□ -0.44
CPNE1-225ENST00000483495 RHNO1Q9BSD3 238 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 LMF2Q9BU23 707 aaKnown RBP12.33□□□□□ -0.44
CPNE1-225ENST00000483495 CCDC90BQ9GZT6 254 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 SPRTNQ9H040 489 aaPredicted RBP12.33□□□□□ -0.44
CPNE1-225ENST00000483495 POLR2J3Q9H1A7 115 aaKnown RBP12.33□□□□□ -0.44
CPNE1-225ENST00000483495 CACYBPQ9HB71 228 aaKnown RBP12.33□□□□□ -0.44
CPNE1-225ENST00000483495 PRTFDC1Q9NRG1 225 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 IMPAD1Q9NX62 359 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 MUTYHQ9UIF7 546 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 PSORS1C1Q9UIG5 152 aa12.33□□□□□ -0.44
CPNE1-225ENST00000483495 H3BMQ9 156 aa12.32□□□□□ -0.44
CPNE1-225ENST00000483495 ZNF749O43361 778 aa12.32□□□□□ -0.44
CPNE1-225ENST00000483495 DUX1O43812 170 aa12.32□□□□□ -0.44
CPNE1-225ENST00000483495 MT-ND2P03891 347 aa12.32□□□□□ -0.44
CPNE1-225ENST00000483495 DBIP07108 87 aaKnown RBP12.32□□□□□ -0.44
CPNE1-225ENST00000483495 TDGF1P13385 188 aa12.32□□□□□ -0.44
CPNE1-225ENST00000483495 MMP11P24347 488 aa12.32□□□□□ -0.44
CPNE1-225ENST00000483495 TRHRP34981 398 aaPredicted RBP12.32□□□□□ -0.44
CPNE1-225ENST00000483495 HSD17B7P56937 341 aa12.32□□□□□ -0.44
CPNE1-225ENST00000483495 TAS2R41P59536 307 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms