RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 CASP2P42575 452 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 TRPC1P48995 793 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 TMED10P49755 219 aaKnown RBP5.37□□□□□ -1.55
CSDE1-207ENST00000483407 AGFG1P52594 562 aaKnown RBP5.37□□□□□ -1.55
CSDE1-207ENST00000483407 HERVK_113P63132 956 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 ERVK-8P63133 956 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 ADAM8P78325 824 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 RPP38P78345 283 aaKnown RBP5.37□□□□□ -1.55
CSDE1-207ENST00000483407 PHEXP78562 749 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 IGLV3-21P80748 117 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-207ENST00000483407 DR1Q01658 176 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 TNFRSF17Q02223 184 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 CD69Q07108 199 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 PDIA2Q13087 525 aaKnown RBP5.37□□□□□ -1.55
CSDE1-207ENST00000483407 DUSP8Q13202 625 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 SLAMF1Q13291 335 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 DAZAP2Q15038 168 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-207ENST00000483407 TOMM20Q15388 145 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 NTRK2Q16620 822 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 DEFB113Q30KQ7 82 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 ACSF3Q4G176 576 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-207ENST00000483407 FBXO48Q5FWF7 155 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 DEPDC1Q5TB30 811 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 KHDRBS2Q5VWX1 349 aaKnown RBP5.37□□□□□ -1.55
CSDE1-207ENST00000483407 OR4C11Q6IEV9 310 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 ADNP2Q6IQ32 1131 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 SEM1Q6ZVN7 128 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 GPR180Q86V85 440 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 OR4N5Q8IXE1 308 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 ST13P4Q8IZP2 240 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-207ENST00000483407 SLC35F6Q8N357 371 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 PDPRQ8NCN5 879 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 FAM156AQ8NDB6 213 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 TNIP2Q8NFZ5 429 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 OR10G3Q8NGC4 313 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 ZNF473Q8WTR7 871 aaKnown RBP5.37□□□□□ -1.55
CSDE1-207ENST00000483407 HOXB13Q92826 284 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-207ENST00000483407 ESAMQ96AP7 390 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 RGMAQ96B86 450 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 PPWD1Q96BP3 646 aaKnown RBP5.37□□□□□ -1.55
CSDE1-207ENST00000483407 CMTM7Q96FZ5 175 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 TIMP4Q99727 224 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 SH3GL2Q99962 352 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 ERVK-6Q9BXR3 956 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 EPB41L4BQ9H329 900 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 WDR41Q9HAD4 459 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 SNX15Q9NRS6 342 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 FAM53CQ9NYF3 392 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 MOCS1Q9NZB8 636 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 MAGEL2Q9UJ55 1249 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 PTBP2Q9UKA9 531 aaKnown RBP5.37□□□□□ -1.55
CSDE1-207ENST00000483407 CNOT11Q9UKZ1 510 aaKnown RBP5.37□□□□□ -1.55
CSDE1-207ENST00000483407 SNX12Q9UMY4 172 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 CAMK2AQ9UQM7 478 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 ERVK-19Q9WJR5 959 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 RPH3AQ9Y2J0 694 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-207ENST00000483407 CHCHD2Q9Y6H1 151 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-207ENST00000483407 PRRC2AP48634 2157 aaKnown RBP5.36□□□□□ -1.55
CSDE1-207ENST00000483407 C2orf92A0A1B0GVN3 265 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 CD8B2A6NJW9 211 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 CLCA1A8K7I4 914 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 FAM171A2A8MVW0 826 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 SAP18O00422 153 aaKnown RBP5.36□□□□□ -1.55
CSDE1-207ENST00000483407 SLC16A6O15403 523 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 PHGDHO43175 533 aaKnown RBP5.36□□□□□ -1.55
CSDE1-207ENST00000483407 PRAMEF4O60810 478 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 CDH16O75309 829 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 SH3BGRLO75368 114 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 TRIM3O75382 744 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-207ENST00000483407 ERN1O75460 977 aaKnown RBP5.36□□□□□ -1.55
CSDE1-207ENST00000483407 SEC31AO94979 1220 aaKnown RBP5.36□□□□□ -1.55
CSDE1-207ENST00000483407 CD1DP15813 335 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 STMN1P16949 149 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 CTSSP25774 331 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 GALNSP34059 522 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 HTR3AP46098 478 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 CDK9P50750 372 aaKnown RBP5.36□□□□□ -1.55
CSDE1-207ENST00000483407 ZNF136P52737 540 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 ARFIP1P53367 373 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 SLC37A1P57057 533 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 SORDQ00796 357 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 LTBQ06643 244 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 CRYZQ08257 329 aaKnown RBP5.36□□□□□ -1.55
CSDE1-207ENST00000483407 DDX39BQ13838 428 aaKnown RBP5.36□□□□□ -1.55
CSDE1-207ENST00000483407 RCAN2Q14206 197 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 EBPQ15125 230 aaKnown RBP5.36□□□□□ -1.55
CSDE1-207ENST00000483407 RPS6KA2Q15349 733 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 OR4D1Q15615 310 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 PRR31Q5SQ13 230 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 C6orf163Q5TEZ5 329 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 NSUN5P2Q63ZY6 315 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 C18orf63Q68DL7 685 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 CYP20A1Q6UW02 462 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 SCIMPQ6UWF3 145 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 TAOK1Q7L7X3 1001 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 MYLK4Q86YV6 388 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-207ENST00000483407 KLHL7Q8IXQ5 586 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 LAS2Q8IYD9 372 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 ZBED8Q8IZ13 594 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 ZCCHC7Q8N3Z6 543 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms