RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 SEC14L4Q9UDX3 406 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 SCN11AQ9UI33 1791 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 SPATA2Q9UM82 520 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 SLC9A8Q9Y2E8 581 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 MRPL11Q9Y3B7 192 aaKnown RBP3.06□□□□□ -1.92
CBX3-207ENST00000481300 STYXL1Q9Y6J8 313 aa3.06□□□□□ -1.92
CBX3-207ENST00000481300 SIPA1L3O60292 1781 aaPredicted RBP3.05□□□□□ -1.92
CBX3-207ENST00000481300 NHSQ6T4R5 1651 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 ZNF609O15014 1411 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 A0A0D9SFI3 127 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 A0A1B0GVY2 172 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 ARHGAP42A6NI28 874 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 SH2D1BO14796 132 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 ARPC1BO15143 372 aaKnown RBP3.05□□□□□ -1.92
CBX3-207ENST00000481300 SH3BGRLO75368 114 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 HPP00738 406 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 SLC4A1P02730 911 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 GSTA1P08263 222 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 FCGR3AP08637 254 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 FOSL2P15408 326 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 AHCYP23526 432 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 SLC7A2P52569 658 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 ZNF131P52739 623 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 NDST1P52848 882 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 NLRP11P59045 1033 aaKnown RBP3.05□□□□□ -1.92
CBX3-207ENST00000481300 RPS4XP62701 263 aaKnown RBP3.05□□□□□ -1.92
CBX3-207ENST00000481300 NME3Q13232 169 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 HAGHQ16775 308 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 SHROOM1Q2M3G4 852 aaPredicted RBP3.05□□□□□ -1.92
CBX3-207ENST00000481300 CNPY1Q3B7I2 92 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 CCDC40Q4G0X9 1142 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 HIGD2BQ4VC39 106 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 VWA2Q5GFL6 755 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 TCHHL1Q5QJ38 904 aaPredicted RBP3.05□□□□□ -1.92
CBX3-207ENST00000481300 SEL1L3Q68CR1 1132 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 RAB12Q6IQ22 244 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 ARMCX5Q6P1M9 558 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 ABRAXAS1Q6UWZ7 409 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 GPR142Q7Z601 462 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 ADAMTSL2Q86TH1 951 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 CCDC71Q8IV32 467 aaPredicted RBP3.05□□□□□ -1.92
CBX3-207ENST00000481300 COLGALT1Q8NBJ5 622 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 ZNRF1Q8ND25 227 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 OR4F5Q8NH21 305 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 SLC13A3Q8WWT9 602 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 PNPLA2Q96AD5 504 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 NSMCE2Q96MF7 247 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 JPH2Q9BR39 696 aaPredicted RBP3.05□□□□□ -1.92
CBX3-207ENST00000481300 SPXQ9BT56 116 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 RPP25Q9BUL9 199 aaKnown RBP3.05□□□□□ -1.92
CBX3-207ENST00000481300 COA1Q9GZY4 146 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 Q9HAA7 133 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 KCNN3Q9UGI6 736 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 TUBGCP4Q9UGJ1 667 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 SLC6A5Q9Y345 797 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 ATG4BQ9Y4P1 393 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 CACNA1FO60840 1977 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 DLG5Q8TDM6 1919 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 DOT1LQ8TEK3 1739 aa3.05□□□□□ -1.92
CBX3-207ENST00000481300 C5P01031 1676 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 RFX7Q2KHR2 1363 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 CCDC171Q6TFL3 1326 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 RAD50Q92878 1312 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 ZNF532Q9HCE3 1301 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 IGHV3-16A0A0C4DH30 117 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 TRIM49BA6NDI0 452 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 K7ERI5 159 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 PROS1P07225 676 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 GNSP15586 552 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 GATA1P15976 413 aaPredicted RBP3.04□□□□□ -1.92
CBX3-207ENST00000481300 IL4RP24394 825 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 SFNP31947 248 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 NUMBP49757 651 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 CCL11P51671 97 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 YBEYP58557 167 aaPredicted RBP3.04□□□□□ -1.92
CBX3-207ENST00000481300 COX10Q12887 443 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 CDC37Q16543 378 aaPredicted RBP3.04□□□□□ -1.92
CBX3-207ENST00000481300 HKDC1Q2TB90 917 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 HERC4Q5GLZ8 1057 aaPredicted RBP3.04□□□□□ -1.92
CBX3-207ENST00000481300 ZNF506Q5JVG8 444 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 RHBDD2Q6NTF9 364 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 PLBD1Q6P4A8 553 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 TAF8Q7Z7C8 310 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 ZNF589Q86UQ0 364 aaPredicted RBP3.04□□□□□ -1.92
CBX3-207ENST00000481300 LUZP1Q86V48 1076 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 SLC22A16Q86VW1 577 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 MLKLQ8NB16 471 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 CSNK1G2-AS1Q8NCQ2 148 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 U2AF1L4Q8WU68 220 aaKnown RBP3.04□□□□□ -1.92
CBX3-207ENST00000481300 ANKRD9Q96BM1 317 aaPredicted RBP3.04□□□□□ -1.92
CBX3-207ENST00000481300 CAPNS2Q96L46 248 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 FTHL17Q9BXU8 183 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 XPO4Q9C0E2 1151 aaKnown RBP3.04□□□□□ -1.92
CBX3-207ENST00000481300 TNMDQ9H2S6 317 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 IL1RL2Q9HB29 575 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 CD209Q9NNX6 404 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 CIDEBQ9UHD4 219 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 CTNNA3Q9UI47 895 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 CCPG1Q9ULG6 757 aa3.04□□□□□ -1.92
CBX3-207ENST00000481300 UBR2Q8IWV8 1755 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms