RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 MTERF3Q96E29 417 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 PELOQ9BRX2 385 aaKnown RBP13.36□□□□□ -0.27
USP11-207ENST00000478596 NMUR2Q9GZQ4 415 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 SDR39U1Q9NRG7 319 aaPredicted RBP13.36□□□□□ -0.27
USP11-207ENST00000478596 LANCL2Q9NS86 450 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 EHD3Q9NZN3 535 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 CCDC167Q9P0B6 97 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 ANK3Q12955 4377 aaKnown RBP13.35□□□□□ -0.27
USP11-207ENST00000478596 OR2W5A6NFC9 320 aa13.35□□□□□ -0.27
USP11-207ENST00000478596 MAN1A2O60476 641 aa13.35□□□□□ -0.27
USP11-207ENST00000478596 CTNSO60931 367 aa13.35□□□□□ -0.27
USP11-207ENST00000478596 SEC24DO94855 1032 aaPredicted RBP13.35□□□□□ -0.27
USP11-207ENST00000478596 CSNK2A2P19784 350 aaPredicted RBP13.35□□□□□ -0.27
USP11-207ENST00000478596 EFNA1P20827 205 aaPredicted RBP13.35□□□□□ -0.27
USP11-207ENST00000478596 NT5EP21589 574 aa13.35□□□□□ -0.27
USP11-207ENST00000478596 NCBP2P52298 156 aaKnown RBP eCLIP13.35□□□□□ -0.27
USP11-207ENST00000478596 POLR2JP52435 117 aaKnown RBP13.35□□□□□ -0.27
USP11-207ENST00000478596 RHAGQ02094 409 aa13.35□□□□□ -0.27
USP11-207ENST00000478596 HSPB3Q12988 150 aa13.35□□□□□ -0.27
USP11-207ENST00000478596 MAPRE2Q15555 327 aa13.35□□□□□ -0.27
USP11-207ENST00000478596 FAM180BQ6P0A1 224 aa13.35□□□□□ -0.27
USP11-207ENST00000478596 GK5Q6ZS86 529 aa13.35□□□□□ -0.27
USP11-207ENST00000478596 LANCL3Q6ZV70 420 aa13.35□□□□□ -0.27
USP11-207ENST00000478596 MTDHQ86UE4 582 aaKnown RBP13.35□□□□□ -0.27
USP11-207ENST00000478596 LIX1LQ8IVB5 337 aa13.35□□□□□ -0.27
USP11-207ENST00000478596 LGI4Q8N135 537 aa13.35□□□□□ -0.27
USP11-207ENST00000478596 VPS37AQ8NEZ2 397 aa13.35□□□□□ -0.27
USP11-207ENST00000478596 OR5M3Q8NGP4 307 aa13.35□□□□□ -0.27
USP11-207ENST00000478596 CIDECQ96AQ7 238 aaPredicted RBP13.35□□□□□ -0.27
USP11-207ENST00000478596 ZBED6CLQ96FA7 236 aaPredicted RBP13.35□□□□□ -0.27
USP11-207ENST00000478596 DUSP26Q9BV47 211 aa13.35□□□□□ -0.27
USP11-207ENST00000478596 SLC35C2Q9NQQ7 365 aa13.35□□□□□ -0.27
USP11-207ENST00000478596 ARMCX1Q9P291 453 aa13.35□□□□□ -0.27
USP11-207ENST00000478596 FAM234BA2RU67 622 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 CCDC154A6NI56 674 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 A8MUA0 341 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 SYT5O00445 386 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 SMAD7O15105 426 aaKnown RBP13.34□□□□□ -0.27
USP11-207ENST00000478596 ANGPT2O15123 496 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 CDC40O60508 579 aaKnown RBP eCLIP13.34□□□□□ -0.27
USP11-207ENST00000478596 GPR75O95800 540 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 ABCB1P08183 1280 aaPredicted RBP13.34□□□□□ -0.27
USP11-207ENST00000478596 CYC1P08574 325 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 CPMP14384 443 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 PORP16435 677 aaPredicted RBP13.34□□□□□ -0.27
USP11-207ENST00000478596 GPX3P22352 226 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 ST13P50502 369 aaKnown RBP13.34□□□□□ -0.27
USP11-207ENST00000478596 XKP51811 444 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 SPDYE7PQ495Y7 208 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 SPANXN4Q5MJ08 99 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 OR4F3Q6IEY1 312 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 PRSS57Q6UWY2 283 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 CPEB2Q7Z5Q1 589 aaKnown RBP13.34□□□□□ -0.27
USP11-207ENST00000478596 PIGWQ7Z7B1 504 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 SCUBE1Q8IWY4 988 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 LRRC75A-AS1Q8N1F1 130 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 SLC5A8Q8N695 610 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 C7orf57Q8NEG2 295 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 OR10Q1Q8NGQ4 319 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 C16orf52Q8NHV5 167 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 UCN3Q969E3 161 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 TESCQ96BS2 214 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 LRRC37BQ96QE4 947 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 SECISBP2Q96T21 854 aaKnown RBP13.34□□□□□ -0.27
USP11-207ENST00000478596 TTYH2Q9BSA4 534 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 CNPPD1Q9BV87 410 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 ALOXE3Q9BYJ1 711 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 RMND5AQ9H871 391 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 TRIM45Q9H8W5 580 aaPredicted RBP13.34□□□□□ -0.27
USP11-207ENST00000478596 MMP25Q9NPA2 562 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 NECTIN3Q9NQS3 549 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 ATP6V1HQ9UI12 483 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 PCDHGB4Q9UN71 923 aa13.34□□□□□ -0.27
USP11-207ENST00000478596 A0A0G2JNJ9 132 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 HS6ST1O60243 411 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 IL6P05231 212 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 GLI4P10075 376 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 LAMP1P11279 417 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 ACVR2AP27037 513 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 MPIP34949 423 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 MANFP55145 182 aaKnown RBP13.33□□□□□ -0.28
USP11-207ENST00000478596 PDE7AQ13946 482 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 EXT1Q16394 746 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 ZNF750Q32MQ0 723 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 MMEL1Q495T6 779 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 ZNF385BQ569K4 471 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 SFT2D3Q587I9 215 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 C6orf10Q5SRN2 563 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 ANXA8L1Q5VT79 327 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 HMBOX1Q6NT76 420 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 PODNL1Q6PEZ8 512 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 DNAJC14Q6Y2X3 702 aaPredicted RBP13.33□□□□□ -0.28
USP11-207ENST00000478596 ANKRD37Q7Z713 158 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 ANKRD46Q86W74 232 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 OR4A15Q8NGL6 344 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 M1APQ8TC57 530 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 ERP27Q96DN0 273 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 RBM18Q96H35 190 aaKnown RBP13.33□□□□□ -0.28
USP11-207ENST00000478596 Q96MF0 132 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 OR52E6Q96RD3 313 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms