RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 IDSB3KWA1 339 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 PLOD2O00469 737 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 AHCYL1O43865 530 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 SNAP91O60641 907 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 GSRP00390 522 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 UGT2B4P06133 528 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 RHOCP08134 193 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 IDSP22304 550 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 CA5AP35218 305 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 ACTR1BP42025 376 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 NUMBP49757 651 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 TDGF1P3P51864 188 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 PNLIPRP2P54317 469 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 KCNK10P57789 538 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 ACTR1AP61163 376 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 ERVK11-1P61568 191 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 ACY1Q03154 408 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 RAPSNQ13702 412 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 MELKQ14680 651 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 FCN2Q15485 313 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 PLEKHS1Q5SXH7 462 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 AGAP7PQ5VUJ5 663 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 SHEQ5VZ18 495 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 KRTAP5-11Q6L8G4 156 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 PWWP2BQ6NUJ5 590 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 CFAP161Q6P656 301 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 FAM199XQ6PEV8 388 aaPredicted RBP4.06□□□□□ -1.76
VPS50-214ENST00000477935 ISCA2Q86U28 154 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 RYBPQ8N488 228 aaPredicted RBP4.06□□□□□ -1.76
VPS50-214ENST00000477935 NECAB1Q8N987 351 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 DNAAF3Q8N9W5 541 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 SLC4A11Q8NBS3 891 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 ADAD2Q8NCV1 583 aaKnown RBP4.06□□□□□ -1.76
VPS50-214ENST00000477935 OR2AP1Q8NGE2 309 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 OR52K2Q8NGK3 314 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 TEKT4Q8WW24 435 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 PATE1Q8WXA2 126 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 ELMO2Q96JJ3 720 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 AGAP4Q96P64 663 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 PSMB7Q99436 277 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 C17orf62Q9BQA9 187 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 LLPHQ9BRT6 129 aaKnown RBP4.06□□□□□ -1.76
VPS50-214ENST00000477935 TMEM121Q9BTD3 319 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 WRAP53Q9BUR4 548 aaKnown RBP4.06□□□□□ -1.76
VPS50-214ENST00000477935 ABHD6Q9BV23 337 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 ZSCAN16Q9H4T2 348 aaPredicted RBP4.06□□□□□ -1.76
VPS50-214ENST00000477935 AKIRIN1Q9H9L7 192 aaPredicted RBP4.06□□□□□ -1.76
VPS50-214ENST00000477935 UCK1Q9HA47 277 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 CHMP1AQ9HD42 196 aaPredicted RBP4.06□□□□□ -1.76
VPS50-214ENST00000477935 PHPT1Q9NRX4 125 aaPredicted RBP4.06□□□□□ -1.76
VPS50-214ENST00000477935 SEC14L3Q9UDX4 400 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 XPO7Q9UIA9 1087 aaKnown RBP4.06□□□□□ -1.76
VPS50-214ENST00000477935 TSPAN16Q9UKR8 245 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 PLAGL1Q9UM63 463 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 PCDHGB4Q9UN71 923 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 PADI2Q9Y2J8 665 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 KCNK7Q9Y2U2 307 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 SONP18583 2426 aaKnown RBP4.05□□□□□ -1.76
VPS50-214ENST00000477935 A0A0D9SEW6 157 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 A0A1W2PQ09 198 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 hCG_1807616A0A1W2PRN6 198 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 ELOVL7A1L3X0 281 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 OR2A25A4D2G3 310 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 LRRIQ3A6PVS8 624 aaPredicted RBP4.05□□□□□ -1.76
VPS50-214ENST00000477935 CTDSP2O14595 271 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 ARHGEF9O43307 516 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 SSX4O60224 188 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 SLC19A2O60779 497 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 CRLF1O75462 422 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 ZMPSTE24O75844 475 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 TRUB2O95900 331 aaKnown RBP4.05□□□□□ -1.76
VPS50-214ENST00000477935 CLPTM1O96005 669 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 HLA-DRAP01903 254 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 PCCBP05166 539 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 FYNP06241 537 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 IVLP07476 585 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 VDRP11473 427 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 PORP16435 677 aaPredicted RBP4.05□□□□□ -1.76
VPS50-214ENST00000477935 NELFEP18615 380 aaKnown RBP4.05□□□□□ -1.76
VPS50-214ENST00000477935 AK4P27144 223 aaPredicted RBP4.05□□□□□ -1.76
VPS50-214ENST00000477935 GNPDA1P46926 289 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 CASP4P49662 377 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 NAP1L1P55209 391 aaKnown RBP4.05□□□□□ -1.76
VPS50-214ENST00000477935 CDH11P55287 796 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 HMGN5P82970 282 aaKnown RBP4.05□□□□□ -1.76
VPS50-214ENST00000477935 DMPKQ09013 629 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 EIF4EBP2Q13542 120 aaPredicted RBP4.05□□□□□ -1.76
VPS50-214ENST00000477935 UGP2Q16851 508 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 KCTD16Q68DU8 428 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 SPOPLQ6IQ16 392 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 PNCKQ6P2M8 343 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 LRRC31Q6UY01 552 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 SH2D5Q6ZV89 423 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 PRSS42Q7Z5A4 293 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 C17orf53Q8N3J3 647 aaPredicted RBP4.05□□□□□ -1.76
VPS50-214ENST00000477935 WFDC11Q8NEX6 87 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 SLC37A2Q8TED4 501 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 PHF10Q8WUB8 498 aaKnown RBP4.05□□□□□ -1.76
VPS50-214ENST00000477935 NRGNQ92686 78 aa4.05□□□□□ -1.76
VPS50-214ENST00000477935 MTERF3Q96E29 417 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms