RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.25□□□□□ -0.61
PRPF39-203ENST00000477626 PGBD2Q6P3X8 592 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 WDR88Q6ZMY6 472 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 OFCC1Q8IZS5 231 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 CDRT4Q8N9R6 151 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 SLC7A13Q8TCU3 470 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 OIT3Q8WWZ8 545 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 WDR77Q9BQA1 342 aaPredicted RBP11.25□□□□□ -0.61
PRPF39-203ENST00000477626 CCDC3Q9BQI4 270 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 YIPF4Q9BSR8 244 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 GAREM1Q9H706 876 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 PSME2Q9UL46 239 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 CDHR4A6H8M9 788 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 ZAR1LA6NP61 321 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 TMEM150CB9EJG8 249 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 TO15178 435 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 TNFAIP8O95379 198 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 GASTP01350 101 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 EIF2S1P05198 315 aaKnown RBP11.25□□□□□ -0.61
PRPF39-203ENST00000477626 SLC15A1P46059 708 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 ARRB1P49407 418 aaPredicted RBP11.25□□□□□ -0.61
PRPF39-203ENST00000477626 GAS1P54826 345 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 RAPSNQ13702 412 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 DCST2Q5T1A1 773 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 STK32CQ86UX6 486 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 PLPP5Q8NEB5 264 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 RASSF5Q8WWW0 418 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 PRRC1Q96M27 445 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 MRPS26Q9BYN8 205 aaKnown RBP11.25□□□□□ -0.61
PRPF39-203ENST00000477626 ANKRD19PQ9H560 264 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 TOR4AQ9NXH8 423 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 ZNF226Q9NYT6 803 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 U3KQV3 271 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 NTN1O95631 604 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 AGR2O95994 175 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 GP1BAP07359 652 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 JUNBP17275 347 aaPredicted RBP11.25□□□□□ -0.61
PRPF39-203ENST00000477626 ACAA2P42765 397 aaKnown RBP11.25□□□□□ -0.61
PRPF39-203ENST00000477626 PRIM2P49643 509 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 CD47Q08722 323 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 C1orf94Q6P1W5 598 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 VWA5B2Q8N398 1253 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 OR52R1Q8NGF1 315 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 PEX11GQ96HA9 241 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 DOK1Q99704 481 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 C3orf14Q9HBI5 128 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 HEMK1Q9Y5R4 338 aaPredicted RBP11.25□□□□□ -0.61
PRPF39-203ENST00000477626 NCOR1O75376 2440 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 A0A1W2PNU3 283 aaPredicted RBP11.24□□□□□ -0.61
PRPF39-203ENST00000477626 CLDN24A6NM45 220 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 M0R3H8 397 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 TLX1P31314 330 aaPredicted RBP11.24□□□□□ -0.61
PRPF39-203ENST00000477626 OMPP47874 163 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 FXYD6P3P58550 94 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 COLEC12Q5KU26 742 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 ENTPD8Q5MY95 495 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 C12orf73Q69YU5 71 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 ARMC6Q6NXE6 501 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 MRPL14Q6P1L8 145 aaKnown RBP11.24□□□□□ -0.61
PRPF39-203ENST00000477626 KIF18BQ86Y91 864 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 CCDC103Q8IW40 242 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 ENTHD1Q8IYW4 607 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 AMER2Q8N7J2 671 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 TTC29Q8NA56 475 aaPredicted RBP11.24□□□□□ -0.61
PRPF39-203ENST00000477626 OR4N2Q8NGD1 307 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 FEVQ99581 238 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 DPYSL5Q9BPU6 564 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 POLR2J2Q9GZM3 115 aaKnown RBP11.24□□□□□ -0.61
PRPF39-203ENST00000477626 POLR2J3Q9H1A7 115 aaKnown RBP11.24□□□□□ -0.61
PRPF39-203ENST00000477626 RAB23Q9ULC3 237 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 ATXN7L1Q9ULK2 861 aaPredicted RBP11.24□□□□□ -0.61
PRPF39-203ENST00000477626 UNC13CQ8NB66 2214 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 FMO6PO60774 539 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 TGM1P22735 817 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 ALDH4A1P30038 563 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 ADH7P40394 386 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 DLX5P56178 289 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 ALDH6A1Q02252 535 aaKnown RBP11.24□□□□□ -0.61
PRPF39-203ENST00000477626 EPS8Q12929 822 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 ERV3-1Q14264 604 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 ANGPT1Q15389 498 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 SLC25A30Q5SVS4 291 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 OTUD3Q5T2D3 398 aaPredicted RBP11.24□□□□□ -0.61
PRPF39-203ENST00000477626 CDCP2Q5VXM1 449 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 B3GNT8Q7Z7M8 397 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 LSRQ86X29 649 aaPredicted RBP11.24□□□□□ -0.61
PRPF39-203ENST00000477626 DHRSXQ8N5I4 330 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 OR9Q2Q8NGE9 314 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 CYGBQ8WWM9 190 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 COL21A1Q96P44 957 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 DUSP21Q9H596 190 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 PDP1Q9P0J1 537 aaPredicted RBP11.24□□□□□ -0.61
PRPF39-203ENST00000477626 BAG5Q9UL15 447 aa11.24□□□□□ -0.61
PRPF39-203ENST00000477626 A0A1B0GX78 115 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 SLC28A2O43868 658 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 IFNA14P01570 189 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 TSPAN19P0C672 248 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 NID1P14543 1247 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 ELK4P28324 431 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 HLCSP50747 726 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms