RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 DNAJC5GQ8N7S2 189 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 R3HDM4Q96D70 268 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 LRR1Q96L50 414 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 ASB16Q96NS5 453 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 KLHL5Q96PQ7 755 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 NSUN3Q9H649 340 aaKnown RBP11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 EXOSC4Q9NPD3 245 aaKnown RBP11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 PLEKHB1Q9UF11 243 aaPredicted RBP11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 INSL5Q9Y5Q6 135 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 ZFP37Q9Y6Q3 630 aaPredicted RBP11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 ANKRD12Q6UB98 2062 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 KIAA0100Q14667 2235 aaKnown RBP11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 MIA3Q5JRA6 1907 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 POM121CA8CG34 1229 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 KDM4EB2RXH2 506 aaPredicted RBP11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 CIDEAO60543 219 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 LATS1O95835 1130 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 RECKO95980 971 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 IGHV2-5P01817 119 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 RD3LP0DJH9 198 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 TYRP14679 529 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 GABRA1P14867 456 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 DDTP30046 118 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 HOXA9P31269 272 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 SLC6A4P31645 630 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 NHLH2Q02577 135 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 ZNF177Q13360 481 aaPredicted RBP11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 TDGQ13569 410 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 HNF4GQ14541 408 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 UBXN2BQ14CS0 331 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 EXOC3L2Q2M3D2 409 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 ATPAF1Q5TC12 328 aaPredicted RBP11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 ALKAL2Q6UX46 152 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 USP30Q70CQ3 517 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 SERPINA12Q8IW75 414 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 CFAP52Q8N1V2 620 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 OR5J2Q8NH18 312 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 ATXN7L3BQ96GX2 97 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 RHOVQ96L33 236 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 PKP4Q99569 1192 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 IL23AQ9NPF7 189 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 ASCL3Q9NQ33 180 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 KCNIP3Q9Y2W7 256 aa11.95□□□□□ -0.5
RTFDC1-207ENST00000477573 ASPDHA6ND91 283 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 GTPBP1O00178 669 aaKnown RBP11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 PRAMEF2O60811 474 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 C1RP00736 705 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 LINC00614P0C842 121 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 SLC35E2BP0CK96 405 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 UGT2B7P16662 529 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 GABRB1P18505 474 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 NFYAP23511 347 aaPredicted RBP11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 SSTR4P31391 388 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 S100A11P31949 105 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 ACVRL1P37023 503 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 GLRBP48167 497 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 PXNP49023 591 aaPredicted RBP11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 ITGA1P56199 1179 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 MAXP61244 160 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 PDZK1IP1Q13113 114 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 SLC35D3Q5M8T2 416 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 HACD4Q5VWC8 232 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 ZNF57Q68EA5 555 aaPredicted RBP11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 KIAA0930Q6ICG6 404 aaPredicted RBP11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 FAM86B1Q8N7N1 296 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 ROBO4Q8WZ75 1007 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 MISP3Q96FF7 219 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 ELMOD3Q96FG2 381 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 TEFMQ96QE5 360 aaKnown RBP11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 TMEM106CQ9BVX2 250 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 KLF16Q9BXK1 252 aaPredicted RBP11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 PIGMQ9H3S5 423 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 CDCP1Q9H5V8 836 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 SPACA1Q9HBV2 294 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 LIMD1Q9UGP4 676 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 GPR31O00270 319 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 PRKYO43930 277 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 ICOSLGO75144 302 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 CRHP06850 196 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 RHOCP08134 193 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 ACRP10323 421 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 GPR3P46089 330 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 RAB5CP51148 216 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 PKIAP61925 76 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 NPRL3Q12980 569 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 GPR176Q14439 515 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 HLXQ14774 488 aaPredicted RBP11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 SMAD1Q15797 465 aaKnown RBP11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 PAGE3Q5JUK9 113 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 C10orf91Q5T1B1 145 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 OTOP2Q7RTS6 562 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 KDELC2Q7Z4H8 507 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 CNTN4Q8IWV2 1026 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 PLA2G15Q8NCC3 412 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 OR8J3Q8NGG0 315 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 OR4A15Q8NGL6 344 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 TMEM163Q8TC26 289 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 SPPL3Q8TCT6 385 aa11.94□□□□□ -0.5
RTFDC1-207ENST00000477573 SLAMF9Q96A28 289 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms