RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 FAM83EQ2M2I3 478 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 TRMT12Q53H54 448 aaKnown RBP6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 GRTP1Q5TC63 336 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 LGSNQ5TDP6 509 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 SLC48A1Q6P1K1 146 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 KLC3Q6P597 504 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 TMEM81Q6P7N7 255 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 C3orf62Q6ZUJ4 267 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 ZNF454Q8N9F8 522 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 OR52B6Q8NGF0 335 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 FNDC9Q8TBE3 224 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 WDR20Q8TBZ3 569 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 TMEM158Q8WZ71 300 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 AKAP1Q92667 903 aaKnown RBP eCLIP6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 KAT2AQ92830 837 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 GFM2Q969S9 779 aaKnown RBP6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 EXOSC8Q96B26 276 aaKnown RBP6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 CTHRC1Q96CG8 243 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 TRMT61AQ96FX7 289 aaKnown RBP6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 UCN2Q96RP3 112 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 TACO1Q9BSH4 297 aaKnown RBP6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 MCMBPQ9BTE3 642 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 FAIM2Q9BWQ8 316 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 UTS2RQ9UKP6 389 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 PSME2Q9UL46 239 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 CLEC4AQ9UMR7 237 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 EMC9Q9Y3B6 208 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 TSC22D4Q9Y3Q8 395 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 PCDHA9Q9Y5H5 950 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 FBN1P35555 2871 aaKnown RBP6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 FAM159BA6NKW6 160 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 FOXE1O00358 373 aaPredicted RBP6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 EIF1AYO14602 144 aaKnown RBP6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 HS3ST1O14792 307 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 ZSCAN12O43309 604 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 EMC8O43402 210 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 SEMA3DO95025 777 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 ATP1B1P05026 303 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 CD8BP10966 210 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 FCGR2AP12318 317 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 MTHFD2P13995 350 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 S1PR1P21453 382 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 DRD5P21918 477 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 EVI2BP34910 448 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 PAFAH1B1P43034 410 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 EIF1AXP47813 144 aaKnown RBP6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 EMDP50402 254 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 SUCLG1P53597 346 aaKnown RBP6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 CLDN15P56746 228 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 CLDN20P56880 219 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 MRPS22P82650 360 aaKnown RBP6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 DUSP2Q05923 314 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 MAP4K2Q12851 820 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 FAPQ12884 760 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 CAPRIN1Q14444 709 aaKnown RBP6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 FGFBP1Q14512 234 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 CHRFAM7AQ494W8 412 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 MROH9Q5TGP6 573 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 FRG2Q64ET8 278 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 C22orf34Q6ZV56 151 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 COMMD6Q7Z4G1 85 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 SLC44A2Q8IWA5 706 aaPredicted RBP6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 CCDC116Q8IYX3 515 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 ZNF619Q8N2I2 560 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 PTGR2Q8N8N7 351 aaPredicted RBP6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 GBP7Q8N8V2 638 aaPredicted RBP6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 OR9A2Q8NGT5 310 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 CDC26Q8NHZ8 85 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 FBF1Q8TES7 1133 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 SELENOMQ8WWX9 145 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 ZDHHC16Q969W1 377 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 PHF21BQ96EK2 531 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 FRG2BQ96QU4 278 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 HBEGFQ99075 208 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 NTMT1Q9BV86 223 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 REG4Q9BYZ8 158 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 ACTR6Q9GZN1 396 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 VPS11Q9H270 941 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 C12orf49Q9H741 205 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 PTGES2Q9H7Z7 377 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 FOLH1BQ9HBA9 442 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 FANCFQ9NPI8 374 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 SDHAF3Q9NRP4 125 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 GIMAP4Q9NUV9 329 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 MED11Q9P086 117 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 ADAM29Q9UKF5 820 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 ZNF337Q9Y3M9 751 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 TNPO3Q9Y5L0 923 aaKnown RBP6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 STAB1Q9NY15 2570 aa6.01□□□□□ -1.45
RTFDC1-206ENST00000477485 ABCA1O95477 2261 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 A0A096LPK6 155 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 A0A1W2PP18 115 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 GNG14A0A1W2PPG7 69 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 OR2M5A3KFT3 312 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 SHISA8B8ZZ34 492 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 CCDC188H7C350 402 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 OR7A17O14581 309 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 PHF1O43189 567 aaPredicted RBP6□□□□□ -1.45
RTFDC1-206ENST00000477485 NDUFB5O43674 189 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 ZIC3O60481 467 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms