RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 C1QTNF12Q5T7M4 302 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 MEDAGQ5VYS4 303 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 LINC00471Q8N535 108 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 SLC16A11Q8NCK7 471 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 CCL4L1Q8NHW4 92 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 PDXPQ96GD0 296 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 SAP130Q9H0E3 1048 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 APOBEC3BQ9UH17 382 aaKnown RBP10.39□□□□□ -0.75
COL27A1-204ENST00000477421 PCDHGB6Q9Y5F9 930 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 PRSS38A1L453 326 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 C12orf71A8MTZ7 269 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 SEMA3DO95025 777 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 WISP3O95389 354 aaPredicted RBP10.38□□□□□ -0.75
COL27A1-204ENST00000477421 IL12BP29460 328 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 MASP1P48740 699 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 OR12D2P58182 307 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 ARHGAP19Q14CB8 494 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 ZNF544Q6NX49 715 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 SYNPOQ8N3V7 929 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 TSEN15Q8WW01 171 aaKnown RBP10.38□□□□□ -0.75
COL27A1-204ENST00000477421 NKD1Q969G9 470 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 SLC41A3Q96GZ6 507 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 OR7D2Q96RA2 312 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 ACTRT3Q9BYD9 372 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 SLC22A4Q9H015 551 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 TRIM36Q9NQ86 728 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 LYARQ9NX58 379 aaKnown RBP10.38□□□□□ -0.75
COL27A1-204ENST00000477421 ASIC5Q9NY37 505 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 PPIEQ9UNP9 301 aaKnown RBP10.38□□□□□ -0.75
COL27A1-204ENST00000477421 WDR37Q9Y2I8 494 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 CMAHPQ9Y471 501 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 RLFQ13129 1914 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 TRAV6A0A075B6T7 132 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 THEGLP0DJG4 465 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 EDNRAP25101 427 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 ATP5A1P25705 553 aaKnown RBP10.38□□□□□ -0.75
COL27A1-204ENST00000477421 RAB15P59190 212 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 RPS15AP62244 130 aaKnown RBP10.38□□□□□ -0.75
COL27A1-204ENST00000477421 BNC1Q01954 994 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 AQP6Q13520 282 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 LINGO2Q7L985 606 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 ACBD7Q8N6N7 88 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 RHOXF1Q8NHV9 184 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 ZFYVE21Q9BQ24 234 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 TTYH2Q9BSA4 534 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 TBL1XR1Q9BZK7 514 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 SRA1Q9HD15 236 aaKnown RBP10.38□□□□□ -0.75
COL27A1-204ENST00000477421 PSORS1C1Q9UIG5 152 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 DOCK6Q96HP0 2047 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 C11orf98E9PRG8 122 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 ARHGAP33O14559 1287 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 SEMA4FO95754 770 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 BCL6P41182 706 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 TAF13Q15543 124 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 EOGTQ5NDL2 527 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 FAM109BQ6ICB4 259 aaPredicted RBP10.38□□□□□ -0.75
COL27A1-204ENST00000477421 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.38□□□□□ -0.75
COL27A1-204ENST00000477421 PROKR2Q8NFJ6 384 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 OR6Q1Q8NGQ2 317 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 AMDHD1Q96NU7 426 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 CHIAQ9BZP6 476 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 TMEFF2Q9UIK5 374 aaPredicted RBP10.38□□□□□ -0.75
COL27A1-204ENST00000477421 HCN2Q9UL51 889 aa10.38□□□□□ -0.75
COL27A1-204ENST00000477421 CEP250Q9BV73 2442 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 A0A0G2JPF8 293 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 HNRNPCL3B7ZW38 293 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 HNRNPCL4P0DMR1 293 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 HNRNPA2B1P22626 353 aaKnown RBP10.37□□□□□ -0.75
COL27A1-204ENST00000477421 OMPP47874 163 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 DESI1Q6ICB0 168 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 ZNF676Q8N7Q3 588 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 ZBTB8BQ8NAP8 495 aaPredicted RBP10.37□□□□□ -0.75
COL27A1-204ENST00000477421 OR2L3Q8NG85 312 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 FAM83CQ9BQN1 747 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 CLEC4MQ9H2X3 399 aaPredicted RBP10.37□□□□□ -0.75
COL27A1-204ENST00000477421 MED20Q9H944 212 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 ELL3Q9HB65 397 aaPredicted RBP10.37□□□□□ -0.75
COL27A1-204ENST00000477421 ACER3Q9NUN7 267 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 DZANK1Q9NVP4 752 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 TBCCD1Q9NVR7 557 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 UCKL1Q9NWZ5 548 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 EXTL2Q9UBQ6 330 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 SERGEFQ9UGK8 458 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 SCN3AQ9NY46 2000 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 SH3D21A4FU49 640 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 FAM172BPA6NC97 362 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 CLDN24A6NM45 220 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 YY2O15391 372 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 OXSR1O95747 527 aaPredicted RBP10.37□□□□□ -0.75
COL27A1-204ENST00000477421 PBX2P40425 430 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 TBCEQ15813 527 aaPredicted RBP10.37□□□□□ -0.75
COL27A1-204ENST00000477421 ALG10BQ5I7T1 473 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 METRNLQ641Q3 311 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 SYCE2Q6PIF2 218 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 PAQR6Q6TCH4 344 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 CEACAM19Q7Z692 300 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 BTLAQ7Z6A9 289 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 Q8N402 240 aa10.37□□□□□ -0.75
COL27A1-204ENST00000477421 DDX31Q9H8H2 851 aaKnown RBP10.37□□□□□ -0.75
COL27A1-204ENST00000477421 MTHFD2LQ9H903 347 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms