RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 OR10G3Q8NGC4 313 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 ABHD4Q8TB40 342 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 SPPL2AQ8TCT8 520 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 ABTB1Q969K4 478 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-214ENST00000477152 ESAMQ96AP7 390 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 PPWD1Q96BP3 646 aaKnown RBP6.64□□□□□ -1.35
BRCA1-214ENST00000477152 TMEM41AQ96HV5 264 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 PWWP2AQ96N64 755 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 ANGPTL4Q9BY76 406 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 SLC6A15Q9H2J7 730 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 PIGMQ9H3S5 423 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 PLAC1Q9HBJ0 212 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 PRODH2Q9UF12 536 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 ADAM29Q9UKF5 820 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 CNOT11Q9UKZ1 510 aaKnown RBP6.64□□□□□ -1.35
BRCA1-214ENST00000477152 EIF3LQ9Y262 564 aaKnown RBP6.64□□□□□ -1.35
BRCA1-214ENST00000477152 CHCHD2Q9Y6H1 151 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-214ENST00000477152 NINQ8N4C6 2090 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 TCRBV5S2A0A599 114 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 PLPP1O14494 284 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 ACOX3O15254 700 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 SH3BGRLO75368 114 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 TRIM3O75382 744 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-214ENST00000477152 KRT38O76015 456 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 WISP3O95389 354 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-214ENST00000477152 RBP1P09455 135 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 CD22P20273 847 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 NT5EP21589 574 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 CPA2P48052 419 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 TRPC1P48995 793 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 RPS13P62277 151 aaKnown RBP6.63□□□□□ -1.35
BRCA1-214ENST00000477152 GTF2H2Q13888 395 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 PCBP2Q15366 365 aaKnown RBP eCLIP6.63□□□□□ -1.352e-7■■■□□ 17.1
BRCA1-214ENST00000477152 GTF2H2CQ6P1K8 395 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 AAGABQ6PD74 315 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 PAMR1Q6UXH9 720 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 ISCA2Q86U28 154 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 SAMD14Q8IZD0 417 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-214ENST00000477152 CNPY4Q8N129 248 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 ZPLD1Q8TCW7 415 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 TMCO6Q96DC7 493 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 RILPQ96NA2 401 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 TRIB1Q96RU8 372 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 MTERF1Q99551 399 aaKnown RBP6.63□□□□□ -1.35
BRCA1-214ENST00000477152 TIMP4Q99727 224 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 SFXN3Q9BWM7 321 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 FAIM2Q9BWQ8 316 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 HHATLQ9HCP6 504 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 BEX4Q9NWD9 120 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-214ENST00000477152 SPRR3Q9UBC9 169 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 ASH2LQ9UBL3 628 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 FETUBQ9UGM5 382 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 C15orf41Q9Y2V0 281 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 POLQO75417 2590 aa6.63□□□□□ -1.35
BRCA1-214ENST00000477152 C1orf226A1L170 272 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 EEF1E1-BLOC1S5C9J1V9 151 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 UBXN8O00124 270 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 EEF1E1O43324 174 aaKnown RBP6.62□□□□□ -1.35
BRCA1-214ENST00000477152 DIAPH2O60879 1101 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 SMIM24O75264 130 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 CBR3O75828 277 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 TBX6O95947 436 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-214ENST00000477152 TMIGD3P0DMS9 266 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-214ENST00000477152 RAC2P15153 192 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 PORP16435 677 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-214ENST00000477152 CCNG1P51959 295 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 DLX5P56178 289 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 EEFSECP57772 596 aaKnown RBP6.62□□□□□ -1.35
BRCA1-214ENST00000477152 PRR5P85299 388 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 CRYZQ08257 329 aaKnown RBP6.62□□□□□ -1.35
BRCA1-214ENST00000477152 FGFBP1Q14512 234 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 FASTKD3Q14CZ7 662 aaKnown RBP6.62□□□□□ -1.35
BRCA1-214ENST00000477152 PDCD1Q15116 288 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 PFKFB4Q16877 469 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 FBXO48Q5FWF7 155 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 CCNYL2Q5T2Q4 361 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 SHEQ5VZ18 495 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 C18orf63Q68DL7 685 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 VASNQ6EMK4 673 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 TMEM81Q6P7N7 255 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 CCDC25Q86WR0 208 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 LIX1LQ8IVB5 337 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 TRPC4APQ8TEL6 797 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 DACH2Q96NX9 599 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 ATOH8Q96SQ7 321 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 SYT3Q9BQG1 590 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 SHCBP1LQ9BZQ2 653 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 TSPYL1Q9H0U9 437 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 OR10A5Q9H207 317 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 ZMAT4Q9H898 229 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 FANCFQ9NPI8 374 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 SEMA4BQ9NPR2 832 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-214ENST00000477152 KLRF1Q9NZS2 232 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 PLEKHA6Q9Y2H5 1048 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 ZNF780BQ9Y6R6 833 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 CCDC168Q8NDH2 2452 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 A0A0A6YYD5 115 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 MBD3L4A6NDZ8 208 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-214ENST00000477152 MBD3L3A6NE82 208 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-214ENST00000477152 MBD3L5A6NJ08 208 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms