RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 ZDHHC13Q8IUH4 622 aa13.42□□□□□ -0.26
COL4A6-206ENST00000477085 OR5K1Q8NHB7 308 aa13.42□□□□□ -0.26
COL4A6-206ENST00000477085 ZNF721Q8TF20 911 aa13.42□□□□□ -0.26
COL4A6-206ENST00000477085 ZNF578Q96N58 590 aaPredicted RBP13.42□□□□□ -0.26
COL4A6-206ENST00000477085 PELOQ9BRX2 385 aaKnown RBP13.42□□□□□ -0.26
COL4A6-206ENST00000477085 SAP130Q9H0E3 1048 aa13.42□□□□□ -0.26
COL4A6-206ENST00000477085 SOX17Q9H6I2 414 aaPredicted RBP13.42□□□□□ -0.26
COL4A6-206ENST00000477085 BAG5Q9UL15 447 aa13.42□□□□□ -0.26
COL4A6-206ENST00000477085 SATB2Q9UPW6 733 aa13.42□□□□□ -0.26
COL4A6-206ENST00000477085 GPR55Q9Y2T6 319 aaPredicted RBP13.42□□□□□ -0.26
COL4A6-206ENST00000477085 NUP210LQ5VU65 1888 aa13.42□□□□□ -0.26
COL4A6-206ENST00000477085 A0A1W2PNU3 283 aaPredicted RBP13.41□□□□□ -0.26
COL4A6-206ENST00000477085 M0R3H8 397 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 PRAMEF2O60811 474 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 KCNK2O95069 426 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 LGI1O95970 557 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 ALPLP05186 524 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 RRM2P31350 389 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 PPP2R2BQ00005 443 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 GK3PQ14409 553 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 FAM69BQ5VUD6 431 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 AP1ARQ63HQ0 302 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 FAAH2Q6GMR7 532 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 TCTN3Q6NUS6 607 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 FAM199XQ6PEV8 388 aaPredicted RBP13.41□□□□□ -0.26
COL4A6-206ENST00000477085 SHQ1Q6PI26 577 aaKnown RBP13.41□□□□□ -0.26
COL4A6-206ENST00000477085 PIP4P1Q86T03 277 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 CARM1Q86X55 608 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 CLIP4Q8N3C7 705 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 COX18Q8N8Q8 333 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 FBXL20Q96IG2 436 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 OSBPL10Q9BXB5 764 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 ITPAQ9BY32 194 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 MTHFD2LQ9H903 347 aaPredicted RBP13.41□□□□□ -0.26
COL4A6-206ENST00000477085 RLIMQ9NVW2 624 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 LRCH1Q9Y2L9 728 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 WDR45Q9Y484 360 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 TESMINQ9Y4I5 508 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 ENPP4Q9Y6X5 453 aa13.41□□□□□ -0.26
COL4A6-206ENST00000477085 OTOGLQ3ZCN5 2332 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 NPIPA5A0A0B4J1W7 369 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 IGHV3-20A0A0C4DH32 117 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 TEX51A0A1B0GUA7 166 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 NPIPA7E9PJI5 369 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 DENRO43583 198 aaKnown RBP13.4□□□□□ -0.26
COL4A6-206ENST00000477085 RFPL3O75679 317 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 HBQ1P09105 142 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 NPIPA8P0DM63 369 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 KCNC4Q03721 635 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 DAG1Q14118 895 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 ELAVL1Q15717 326 aaKnown RBP13.4□□□□□ -0.26
COL4A6-206ENST00000477085 GPR68Q15743 365 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 NPTX1Q15818 432 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 NNATQ16517 81 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 ZNF311Q5JNZ3 666 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 MRPL14Q6P1L8 145 aaKnown RBP13.4□□□□□ -0.26
COL4A6-206ENST00000477085 SVOPLQ8N434 492 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 OR4C15Q8NGM1 316 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 OR52P1PQ8NH57 321 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 VANGL1Q8TAA9 524 aaPredicted RBP13.4□□□□□ -0.26
COL4A6-206ENST00000477085 SLC2A12Q8TD20 617 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 PROX1Q92786 737 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 RMND5BQ96G75 393 aaPredicted RBP13.4□□□□□ -0.26
COL4A6-206ENST00000477085 SPSB2Q99619 263 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 NUDT9Q9BW91 350 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 PINK1Q9BXM7 581 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 OR8D2Q9GZM6 311 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 VCXQ9H320 206 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 SLC39A1Q9NY26 324 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 CALML5Q9NZT1 146 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 IFT80Q9P2H3 777 aaPredicted RBP13.4□□□□□ -0.26
COL4A6-206ENST00000477085 RHCGQ9UBD6 479 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 RAB26Q9ULW5 256 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 SAMHD1Q9Y3Z3 626 aaKnown RBP13.4□□□□□ -0.26
COL4A6-206ENST00000477085 PCDHGA8Q9Y5G5 932 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 LYVE1Q9Y5Y7 322 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 AP4B1Q9Y6B7 739 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 AGAP5A6NIR3 686 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 IDSB3KWA1 339 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 B4E171 279 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 PEX12O00623 359 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 BRINP1O60477 761 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 TPST2O60704 377 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 CPNE3O75131 537 aaKnown RBP13.4□□□□□ -0.26
COL4A6-206ENST00000477085 E2F6O75461 281 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 STX11O75558 287 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 DNAJB5O75953 348 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 SNAP29O95721 258 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 IFNW1P05000 195 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 ALPPP05187 535 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 RPS4Y1P22090 263 aaKnown RBP13.4□□□□□ -0.26
COL4A6-206ENST00000477085 DNAJA1P31689 397 aaKnown RBP13.4□□□□□ -0.26
COL4A6-206ENST00000477085 TSPAN7P41732 249 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 LIMS1P48059 325 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 ALDH3A2P51648 485 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 POU6F2P78424 691 aaPredicted RBP13.4□□□□□ -0.26
COL4A6-206ENST00000477085 OCA2Q04671 838 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 ISXQ2M1V0 245 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 CYP4Z1Q86W10 505 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 OR7G1Q8NGA0 311 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms