RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 RNF24Q9Y225 148 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 MOB4Q9Y3A3 225 aa4.7□□□□□ -1.66
VPS50-212ENST00000476413 EXOSC1Q9Y3B2 195 aaKnown RBP4.7□□□□□ -1.66
VPS50-212ENST00000476413 GON4LQ3T8J9 2241 aa4.69□□□□□ -1.66
VPS50-212ENST00000476413 CCDC7Q96M83 1385 aa4.69□□□□□ -1.66
VPS50-212ENST00000476413 ACOD1A6NK06 481 aa4.69□□□□□ -1.66
VPS50-212ENST00000476413 SRRM5B3KS81 715 aa4.69□□□□□ -1.66
VPS50-212ENST00000476413 NUDT14O95848 222 aa4.69□□□□□ -1.66
VPS50-212ENST00000476413 MT-ND1P03886 318 aa4.69□□□□□ -1.66
VPS50-212ENST00000476413 HSD17B1P14061 328 aa4.69□□□□□ -1.66
VPS50-212ENST00000476413 STK19P49842 368 aaPredicted RBP4.69□□□□□ -1.66
VPS50-212ENST00000476413 TMEM52BQ4KMG9 183 aa4.69□□□□□ -1.66
VPS50-212ENST00000476413 MS4A13Q5J8X5 152 aa4.69□□□□□ -1.66
VPS50-212ENST00000476413 ZNF311Q5JNZ3 666 aa4.69□□□□□ -1.66
VPS50-212ENST00000476413 NHLRC3Q5JS37 347 aa4.69□□□□□ -1.66
VPS50-212ENST00000476413 CCBE1Q6UXH8 406 aaPredicted RBP4.69□□□□□ -1.66
VPS50-212ENST00000476413 TSEN54Q7Z6J9 526 aaKnown RBP4.69□□□□□ -1.66
VPS50-212ENST00000476413 CENPLQ8N0S6 344 aaPredicted RBP4.69□□□□□ -1.66
VPS50-212ENST00000476413 SPEM1Q8N4L4 309 aa4.69□□□□□ -1.66
VPS50-212ENST00000476413 BEST4Q8NFU0 473 aa4.69□□□□□ -1.66
VPS50-212ENST00000476413 OR5AU1Q8NGC0 362 aa4.69□□□□□ -1.66
VPS50-212ENST00000476413 OR2T34Q8NGX1 318 aa4.69□□□□□ -1.66
VPS50-212ENST00000476413 ITLN1Q8WWA0 313 aa4.69□□□□□ -1.66
VPS50-212ENST00000476413 ART4Q93070 314 aa4.69□□□□□ -1.66
VPS50-212ENST00000476413 TRIM9Q9C026 710 aa4.69□□□□□ -1.66
VPS50-212ENST00000476413 AMBNQ9NP70 447 aa4.69□□□□□ -1.66
VPS50-212ENST00000476413 C1orf123Q9NWV4 160 aa4.69□□□□□ -1.66
VPS50-212ENST00000476413 RDH8Q9NYR8 311 aa4.69□□□□□ -1.66
VPS50-212ENST00000476413 TMCC3Q9ULS5 477 aa4.69□□□□□ -1.66
VPS50-212ENST00000476413 TRIM49BA6NDI0 452 aa4.68□□□□□ -1.66
VPS50-212ENST00000476413 GSTT2P0CG29 244 aa4.68□□□□□ -1.66
VPS50-212ENST00000476413 GSTT2BP0CG30 244 aa4.68□□□□□ -1.66
VPS50-212ENST00000476413 TNNI3P19429 210 aa4.68□□□□□ -1.66
VPS50-212ENST00000476413 DRD5P21918 477 aa4.68□□□□□ -1.66
VPS50-212ENST00000476413 HTR2AP28223 471 aa4.68□□□□□ -1.66
VPS50-212ENST00000476413 KIF5BP33176 963 aa4.68□□□□□ -1.66
VPS50-212ENST00000476413 DLSTP36957 453 aa4.68□□□□□ -1.66
VPS50-212ENST00000476413 ACADVLP49748 655 aa4.68□□□□□ -1.66
VPS50-212ENST00000476413 VEGFCP49767 419 aa4.68□□□□□ -1.66
VPS50-212ENST00000476413 MS4A2Q01362 244 aa4.68□□□□□ -1.66
VPS50-212ENST00000476413 EIF2B1Q14232 305 aaKnown RBP4.68□□□□□ -1.66
VPS50-212ENST00000476413 LTB4RQ15722 352 aa4.68□□□□□ -1.66
VPS50-212ENST00000476413 ZIC1Q15915 447 aa4.68□□□□□ -1.66
VPS50-212ENST00000476413 BTNL3Q6UXE8 466 aa4.68□□□□□ -1.66
VPS50-212ENST00000476413 TMUB2Q71RG4 321 aa4.68□□□□□ -1.66
VPS50-212ENST00000476413 FGFRL1Q8N441 504 aa4.68□□□□□ -1.66
VPS50-212ENST00000476413 ARL6IP6Q8N6S5 226 aa4.68□□□□□ -1.66
VPS50-212ENST00000476413 GMCL1P1Q8NEA9 526 aa4.68□□□□□ -1.66
VPS50-212ENST00000476413 UPRTQ96BW1 309 aa4.68□□□□□ -1.66
VPS50-212ENST00000476413 HPDLQ96IR7 371 aa4.68□□□□□ -1.66
VPS50-212ENST00000476413 PIWIL1Q96J94 861 aaKnown RBP4.68□□□□□ -1.66
VPS50-212ENST00000476413 ATOH8Q96SQ7 321 aa4.68□□□□□ -1.66
VPS50-212ENST00000476413 SOSTQ9BQB4 213 aa4.68□□□□□ -1.66
VPS50-212ENST00000476413 COG4Q9H9E3 785 aa4.68□□□□□ -1.66
VPS50-212ENST00000476413 MEPEQ9NQ76 525 aaPredicted RBP4.68□□□□□ -1.66
VPS50-212ENST00000476413 RBM28Q9NW13 759 aaKnown RBP4.68□□□□□ -1.66
VPS50-212ENST00000476413 ESYT2A0FGR8 921 aa4.67□□□□□ -1.66
VPS50-212ENST00000476413 MAPK13O15264 365 aa4.67□□□□□ -1.66
VPS50-212ENST00000476413 GALR3O60755 368 aaPredicted RBP4.67□□□□□ -1.66
VPS50-212ENST00000476413 PCCBP05166 539 aa4.67□□□□□ -1.66
VPS50-212ENST00000476413 ASNSP08243 561 aa4.67□□□□□ -1.66
VPS50-212ENST00000476413 ADSSP30520 456 aa4.67□□□□□ -1.66
VPS50-212ENST00000476413 SOX6P35712 828 aa4.67□□□□□ -1.66
VPS50-212ENST00000476413 ARHGDIAP52565 204 aa4.67□□□□□ -1.66
VPS50-212ENST00000476413 RPS6P62753 249 aaKnown RBP4.67□□□□□ -1.66
VPS50-212ENST00000476413 RAB35Q15286 201 aa4.67□□□□□ -1.66
VPS50-212ENST00000476413 NCR3LG1Q68D85 454 aa4.67□□□□□ -1.66
VPS50-212ENST00000476413 CES3Q6UWW8 571 aa4.67□□□□□ -1.66
VPS50-212ENST00000476413 OR6T1Q8NGN1 323 aa4.67□□□□□ -1.66
VPS50-212ENST00000476413 OR10T2Q8NGX3 314 aa4.67□□□□□ -1.66
VPS50-212ENST00000476413 TRIM6Q9C030 488 aaPredicted RBP4.67□□□□□ -1.66
VPS50-212ENST00000476413 RAB33BQ9H082 229 aa4.67□□□□□ -1.66
VPS50-212ENST00000476413 SLC25A51Q9H1U9 297 aa4.67□□□□□ -1.66
VPS50-212ENST00000476413 VPS33BQ9H267 617 aa4.67□□□□□ -1.66
VPS50-212ENST00000476413 CHMP2BQ9UQN3 213 aa4.67□□□□□ -1.66
VPS50-212ENST00000476413 KIF3AQ9Y496 699 aa4.67□□□□□ -1.66
VPS50-212ENST00000476413 AP4B1Q9Y6B7 739 aa4.67□□□□□ -1.66
VPS50-212ENST00000476413 SF3B1O75533 1304 aaKnown RBP eCLIP4.67□□□□□ -1.66
VPS50-212ENST00000476413 A0A1B0GU03 582 aa4.66□□□□□ -1.66
VPS50-212ENST00000476413 ZSCAN5CA6NGD5 496 aaPredicted RBP4.66□□□□□ -1.66
VPS50-212ENST00000476413 ZNF487B1APH4 448 aa4.66□□□□□ -1.66
VPS50-212ENST00000476413 CPLX1O14810 134 aa4.66□□□□□ -1.66
VPS50-212ENST00000476413 SNRPCP09234 159 aaKnown RBP4.66□□□□□ -1.66
VPS50-212ENST00000476413 EPB41P11171 864 aaKnown RBP4.66□□□□□ -1.66
VPS50-212ENST00000476413 FOLR2P14207 255 aa4.66□□□□□ -1.66
VPS50-212ENST00000476413 UQCRBP14927 111 aa4.66□□□□□ -1.66
VPS50-212ENST00000476413 CAPN2P17655 700 aa4.66□□□□□ -1.66
VPS50-212ENST00000476413 XRCC1P18887 633 aaPredicted RBP4.66□□□□□ -1.66
VPS50-212ENST00000476413 BRCC3P46736 316 aa4.66□□□□□ -1.66
VPS50-212ENST00000476413 NAPAP54920 295 aa4.66□□□□□ -1.66
VPS50-212ENST00000476413 IL9RQ01113 521 aa4.66□□□□□ -1.66
VPS50-212ENST00000476413 ABRAXAS2Q15018 415 aa4.66□□□□□ -1.66
VPS50-212ENST00000476413 UBE2V2Q15819 145 aa4.66□□□□□ -1.66
VPS50-212ENST00000476413 USH1GQ495M9 461 aa4.66□□□□□ -1.66
VPS50-212ENST00000476413 CYBRD1Q53TN4 286 aa4.66□□□□□ -1.66
VPS50-212ENST00000476413 SLC25A42Q86VD7 318 aa4.66□□□□□ -1.66
VPS50-212ENST00000476413 ARL14Q8N4G2 192 aa4.66□□□□□ -1.66
VPS50-212ENST00000476413 NANPQ8TBE9 248 aa4.66□□□□□ -1.66
VPS50-212ENST00000476413 TRIM44Q96DX7 344 aaPredicted RBP4.66□□□□□ -1.66
VPS50-212ENST00000476413 TPPP3Q9BW30 176 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms