RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 NUDT8Q8WV74 236 aa19.32■□□□□ 0.68
LIME1-204ENST00000476183 RNF138Q8WVD3 245 aa19.32■□□□□ 0.68
LIME1-204ENST00000476183 TMCO6Q96DC7 493 aa19.32■□□□□ 0.68
LIME1-204ENST00000476183 OR10H1Q9Y4A9 318 aa19.32■□□□□ 0.68
LIME1-204ENST00000476183 FIGNL2A6NMB9 653 aa19.31■□□□□ 0.68
LIME1-204ENST00000476183 ABCB7O75027 752 aa19.31■□□□□ 0.68
LIME1-204ENST00000476183 BGNP21810 368 aa19.31■□□□□ 0.68
LIME1-204ENST00000476183 ELAVL4P26378 380 aaKnown RBP19.31■□□□□ 0.68
LIME1-204ENST00000476183 IL12BP29460 328 aa19.31■□□□□ 0.68
LIME1-204ENST00000476183 PNLIPRP2P54317 469 aa19.31■□□□□ 0.68
LIME1-204ENST00000476183 PSPHP78330 225 aa19.31■□□□□ 0.68
LIME1-204ENST00000476183 GAB1Q13480 694 aa19.31■□□□□ 0.68
LIME1-204ENST00000476183 EFR3AQ14156 821 aa19.31■□□□□ 0.68
LIME1-204ENST00000476183 EIPR1Q53HC9 387 aa19.31■□□□□ 0.68
LIME1-204ENST00000476183 WLSQ5T9L3 541 aa19.31■□□□□ 0.68
LIME1-204ENST00000476183 IL23RQ5VWK5 629 aa19.31■□□□□ 0.68
LIME1-204ENST00000476183 FNDC5Q8NAU1 212 aa19.31■□□□□ 0.68
LIME1-204ENST00000476183 OR7A2PQ8NGA2 310 aa19.31■□□□□ 0.68
LIME1-204ENST00000476183 ZBED6CLQ96FA7 236 aaPredicted RBP19.31■□□□□ 0.68
LIME1-204ENST00000476183 SORT1Q99523 831 aa19.31■□□□□ 0.68
LIME1-204ENST00000476183 LMF2Q9BU23 707 aaKnown RBP19.31■□□□□ 0.68
LIME1-204ENST00000476183 ATP6V1HQ9UI12 483 aa19.31■□□□□ 0.68
LIME1-204ENST00000476183 MAPRE3Q9UPY8 281 aa19.31■□□□□ 0.68
LIME1-204ENST00000476183 RNF6Q9Y252 685 aa19.31■□□□□ 0.68
LIME1-204ENST00000476183 SLC6A5Q9Y345 797 aa19.31■□□□□ 0.68
LIME1-204ENST00000476183 NUP214P35658 2090 aaPredicted RBP19.3■□□□□ 0.68
LIME1-204ENST00000476183 C15orf38-AP3S2A0A0A6YYH1 394 aa19.3■□□□□ 0.68
LIME1-204ENST00000476183 SCAMP2O15127 329 aaKnown RBP19.3■□□□□ 0.68
LIME1-204ENST00000476183 CYP4B1P13584 511 aa19.3■□□□□ 0.68
LIME1-204ENST00000476183 MAPK1P28482 360 aa19.3■□□□□ 0.68
LIME1-204ENST00000476183 GPC1P35052 558 aa19.3■□□□□ 0.68
LIME1-204ENST00000476183 KRT20P35900 424 aa19.3■□□□□ 0.68
LIME1-204ENST00000476183 GAS1P54826 345 aa19.3■□□□□ 0.68
LIME1-204ENST00000476183 MANFP55145 182 aaKnown RBP19.3■□□□□ 0.68
LIME1-204ENST00000476183 CRYZQ08257 329 aaKnown RBP19.3■□□□□ 0.68
LIME1-204ENST00000476183 PDCD2Q16342 344 aaPredicted RBP19.3■□□□□ 0.68
LIME1-204ENST00000476183 CYP27C1Q4G0S4 372 aa19.3■□□□□ 0.68
LIME1-204ENST00000476183 WIPI1Q5MNZ9 446 aaPredicted RBP19.3■□□□□ 0.68
LIME1-204ENST00000476183 CCDC71Q8IV32 467 aaPredicted RBP19.3■□□□□ 0.68
LIME1-204ENST00000476183 RND1Q92730 232 aa19.3■□□□□ 0.68
LIME1-204ENST00000476183 MARVELD3Q96A59 401 aa19.3■□□□□ 0.68
LIME1-204ENST00000476183 TUBGCP3Q96CW5 907 aa19.3■□□□□ 0.68
LIME1-204ENST00000476183 MTERF3Q96E29 417 aa19.3■□□□□ 0.68
LIME1-204ENST00000476183 TTYH2Q9BSA4 534 aa19.3■□□□□ 0.68
LIME1-204ENST00000476183 EQTNQ9NQ60 294 aa19.3■□□□□ 0.68
LIME1-204ENST00000476183 SERHLQ9NQF3 203 aa19.3■□□□□ 0.68
LIME1-204ENST00000476183 ACSS1Q9NUB1 689 aaPredicted RBP19.3■□□□□ 0.68
LIME1-204ENST00000476183 ALKBH4Q9NXW9 302 aa19.3■□□□□ 0.68
LIME1-204ENST00000476183 COQ3Q9NZJ6 369 aa19.3■□□□□ 0.68
LIME1-204ENST00000476183 FLRT3Q9NZU0 649 aa19.3■□□□□ 0.68
LIME1-204ENST00000476183 CBLCQ9ULV8 474 aa19.3■□□□□ 0.68
LIME1-204ENST00000476183 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.29■□□□□ 0.68
LIME1-204ENST00000476183 C17orf51A8MQB3 221 aa19.29■□□□□ 0.68
LIME1-204ENST00000476183 B4DXG7 233 aa19.29■□□□□ 0.68
LIME1-204ENST00000476183 WDR1O75083 606 aa19.29■□□□□ 0.68
LIME1-204ENST00000476183 MYZAPP0CAP1 466 aa19.29■□□□□ 0.68
LIME1-204ENST00000476183 GLI4P10075 376 aa19.29■□□□□ 0.68
LIME1-204ENST00000476183 LAMP1P11279 417 aa19.29■□□□□ 0.68
LIME1-204ENST00000476183 HPCAL1P37235 193 aa19.29■□□□□ 0.68
LIME1-204ENST00000476183 MAP3K8P41279 467 aa19.29■□□□□ 0.68
LIME1-204ENST00000476183 SLC1A6P48664 564 aa19.29■□□□□ 0.68
LIME1-204ENST00000476183 WDR4P57081 412 aaKnown RBP19.29■□□□□ 0.68
LIME1-204ENST00000476183 TOMM20Q15388 145 aa19.29■□□□□ 0.68
LIME1-204ENST00000476183 B3GNT6Q6ZMB0 384 aa19.29■□□□□ 0.68
LIME1-204ENST00000476183 R3HCC1LQ7Z5L2 792 aaKnown RBP19.29■□□□□ 0.68
LIME1-204ENST00000476183 YRDCQ86U90 279 aaKnown RBP19.29■□□□□ 0.68
LIME1-204ENST00000476183 KRTCAP2Q8N6L1 136 aa19.29■□□□□ 0.68
LIME1-204ENST00000476183 ANKRD42Q8N9B4 389 aa19.29■□□□□ 0.68
LIME1-204ENST00000476183 FAM83FQ8NEG4 500 aaPredicted RBP19.29■□□□□ 0.68
LIME1-204ENST00000476183 ZFP28Q8NHY6 868 aa19.29■□□□□ 0.68
LIME1-204ENST00000476183 HOXB13Q92826 284 aaPredicted RBP19.29■□□□□ 0.68
LIME1-204ENST00000476183 GIMAP5Q96F15 307 aa19.29■□□□□ 0.68
LIME1-204ENST00000476183 PPP1R36Q96LQ0 422 aa19.29■□□□□ 0.68
LIME1-204ENST00000476183 TIMP4Q99727 224 aa19.29■□□□□ 0.68
LIME1-204ENST00000476183 CHST11Q9NPF2 352 aa19.29■□□□□ 0.68
LIME1-204ENST00000476183 NTMQ9P121 344 aa19.29■□□□□ 0.68
LIME1-204ENST00000476183 RAP2CQ9Y3L5 183 aa19.29■□□□□ 0.68
LIME1-204ENST00000476183 WIF1Q9Y5W5 379 aa19.29■□□□□ 0.68
LIME1-204ENST00000476183 LRBAP50851 2863 aa19.29■□□□□ 0.68
LIME1-204ENST00000476183 DCHS2Q6V1P9 2916 aa19.28■□□□□ 0.68
LIME1-204ENST00000476183 ARHGAP21Q5T5U3 1957 aa19.28■□□□□ 0.68
LIME1-204ENST00000476183 APCP25054 2843 aa19.28■□□□□ 0.68
LIME1-204ENST00000476183 GXYLT2A0PJZ3 443 aa19.28■□□□□ 0.68
LIME1-204ENST00000476183 HNRNPRO43390 633 aaKnown RBP19.28■□□□□ 0.68
LIME1-204ENST00000476183 ERLIN1O75477 346 aa19.28■□□□□ 0.68
LIME1-204ENST00000476183 PRPS2P11908 318 aa19.28■□□□□ 0.68
LIME1-204ENST00000476183 PRF1P14222 555 aa19.28■□□□□ 0.68
LIME1-204ENST00000476183 GRK2P25098 689 aa19.28■□□□□ 0.68
LIME1-204ENST00000476183 DCST1Q5T197 706 aa19.28■□□□□ 0.68
LIME1-204ENST00000476183 C1orf185Q5T7R7 199 aa19.28■□□□□ 0.68
LIME1-204ENST00000476183 ACAD11Q709F0 780 aa19.28■□□□□ 0.68
LIME1-204ENST00000476183 ULK2Q8IYT8 1036 aa19.28■□□□□ 0.68
LIME1-204ENST00000476183 CA5BP1Q8WTZ4 195 aa19.28■□□□□ 0.68
LIME1-204ENST00000476183 PAIP2Q9BPZ3 127 aaKnown RBP19.28■□□□□ 0.68
LIME1-204ENST00000476183 Q9N2J8 555 aa19.28■□□□□ 0.68
LIME1-204ENST00000476183 SIRT3Q9NTG7 399 aaPredicted RBP19.28■□□□□ 0.68
LIME1-204ENST00000476183 HAO1Q9UJM8 370 aa19.28■□□□□ 0.68
LIME1-204ENST00000476183 FBXL2Q9UKC9 423 aa19.28■□□□□ 0.68
LIME1-204ENST00000476183 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.28■□□□□ 0.68
LIME1-204ENST00000476183 PCDHGB3Q9Y5G1 929 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms