RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 ACER2Q5QJU3 275 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 LYPD4Q6UWN0 246 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 IKBIPQ70UQ0 350 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 NPAS3Q8IXF0 933 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 GPR135Q8IZ08 494 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 OXR1Q8N573 874 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 ZFP41Q8N8Y5 198 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 L3MBTL4Q8NA19 623 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 UPF1Q92900 1129 aaKnown RBP eCLIP9.96□□□□□ -0.812e-6■■■■■ 27
ABCF1-205ENST00000475993 HIST1H2AHQ96KK5 128 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 ZFP42Q96MM3 310 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 ZNF582Q96NG8 517 aaPredicted RBP9.96□□□□□ -0.81
ABCF1-205ENST00000475993 DDOQ99489 341 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 SLC38A3Q99624 504 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 SEMA4CQ9C0C4 833 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 EVA1AQ9H8M9 152 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 SLC6A5Q9Y345 797 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 DNAJC25-GNG10A0A024R161 153 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 HLA-DPB1P04440 258 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 S100A8P05109 93 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 PVALBP20472 110 aaPredicted RBP9.96□□□□□ -0.81
ABCF1-205ENST00000475993 EIF2S3P41091 472 aaKnown RBP9.96□□□□□ -0.81
ABCF1-205ENST00000475993 PSMD4P55036 377 aaKnown RBP9.96□□□□□ -0.81
ABCF1-205ENST00000475993 YBEYP58557 167 aaPredicted RBP9.96□□□□□ -0.81
ABCF1-205ENST00000475993 CACNG1Q06432 222 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 SSPNQ14714 243 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 GCNT6Q5T4J0 391 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 MFSD14CQ5VZR4 134 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 OAFQ86UD1 273 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 NR2C2APQ86WQ0 139 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 MCATQ8IVS2 390 aaKnown RBP9.96□□□□□ -0.81
ABCF1-205ENST00000475993 PPTC7Q8NI37 304 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 ADAMTS19Q8TE59 1207 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 SETD7Q8WTS6 366 aaKnown RBP9.96□□□□□ -0.81
ABCF1-205ENST00000475993 C11orf24Q96F05 449 aaPredicted RBP9.96□□□□□ -0.81
ABCF1-205ENST00000475993 SSX3Q99909 188 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 CACNG6Q9BXT2 260 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 SAP130Q9H0E3 1048 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 TMEM38AQ9H6F2 299 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 EQTNQ9NQ60 294 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 TVP23BQ9NYZ1 205 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 ZNF282Q9UDV7 671 aaPredicted RBP9.96□□□□□ -0.81
ABCF1-205ENST00000475993 GPR160Q9UJ42 338 aa9.96□□□□□ -0.81
ABCF1-205ENST00000475993 A0A1W2PQH9 124 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 A0A1W2PRQ8 180 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 TRBC2A0A5B9 178 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 DRGXA6NNA5 263 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 TNFRSF10BO14763 440 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 TXNL1O43396 289 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 TRBC1P01850 177 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 EIF4EP06730 217 aaKnown RBP9.96□□□□□ -0.82
ABCF1-205ENST00000475993 THP07101 528 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 ACTR1BP42025 376 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 CASP9P55211 416 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 MAZP56270 477 aaKnown RBP9.96□□□□□ -0.82
ABCF1-205ENST00000475993 EFNB1P98172 346 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 CXCL9Q07325 125 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 RAB40BQ12829 278 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 CHRNA6Q15825 494 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 EIF2S3LQ2VIR3 472 aaKnown RBP9.96□□□□□ -0.82
ABCF1-205ENST00000475993 FRG2Q64ET8 278 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 C3orf33Q6P1S2 294 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 HAGHLQ6PII5 290 aaPredicted RBP9.96□□□□□ -0.82
ABCF1-205ENST00000475993 ZNF852Q6ZMS4 543 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 CAMKMTQ7Z624 323 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 DPPA2Q7Z7J5 298 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 CMIPQ8IY22 773 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 CELF5Q8N6W0 485 aaKnown RBP9.96□□□□□ -0.82
ABCF1-205ENST00000475993 WDSUB1Q8N9V3 476 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 TRPV1Q8NER1 839 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 SCARB1Q8WTV0 552 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 MRPS24Q96EL2 167 aaKnown RBP9.96□□□□□ -0.82
ABCF1-205ENST00000475993 LRR1Q96L50 414 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 FRG2BQ96QU4 278 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 ABHD1Q96SE0 405 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 CPEB1Q9BZB8 566 aaKnown RBP9.96□□□□□ -0.82
ABCF1-205ENST00000475993 SEMA3GQ9NS98 782 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 GHRLQ9UBU3 117 aa9.96□□□□□ -0.82
ABCF1-205ENST00000475993 WDR90Q96KV7 1748 aa9.95□□□□□ -0.82
ABCF1-205ENST00000475993 TRPM7Q96QT4 1865 aa9.95□□□□□ -0.82
ABCF1-205ENST00000475993 PTPRDP23468 1912 aa9.95□□□□□ -0.82
ABCF1-205ENST00000475993 ZNF593O00488 134 aaPredicted RBP9.95□□□□□ -0.82
ABCF1-205ENST00000475993 HPXP02790 462 aa9.95□□□□□ -0.82
ABCF1-205ENST00000475993 IFNW1P05000 195 aa9.95□□□□□ -0.82
ABCF1-205ENST00000475993 LIMS3P0CW19 117 aa9.95□□□□□ -0.82
ABCF1-205ENST00000475993 LIMS4P0CW20 117 aa9.95□□□□□ -0.82
ABCF1-205ENST00000475993 ACP2P11117 423 aa9.95□□□□□ -0.82
ABCF1-205ENST00000475993 OR1E1P30953 314 aa9.95□□□□□ -0.82
ABCF1-205ENST00000475993 SOX18P35713 384 aa9.95□□□□□ -0.82
ABCF1-205ENST00000475993 CD79BP40259 229 aa9.95□□□□□ -0.82
ABCF1-205ENST00000475993 PTGFRP43088 359 aa9.95□□□□□ -0.82
ABCF1-205ENST00000475993 LIM2P55344 173 aa9.95□□□□□ -0.82
ABCF1-205ENST00000475993 PCBP3P57721 371 aaKnown RBP9.95□□□□□ -0.82
ABCF1-205ENST00000475993 TAP2Q03519 686 aa9.95□□□□□ -0.82
ABCF1-205ENST00000475993 SNTB1Q13884 538 aaKnown RBP9.95□□□□□ -0.82
ABCF1-205ENST00000475993 INSL4Q14641 139 aa9.95□□□□□ -0.82
ABCF1-205ENST00000475993 GRIN2CQ14957 1233 aa9.95□□□□□ -0.82
ABCF1-205ENST00000475993 ZXDCQ2QGD7 858 aaPredicted RBP9.95□□□□□ -0.82
ABCF1-205ENST00000475993 CPTPQ5TA50 214 aa9.95□□□□□ -0.82
ABCF1-205ENST00000475993 B3GNTL1Q67FW5 361 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms