RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 TMEM151BQ8IW70 566 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 KBTBD2Q8IY47 623 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 LGI4Q8N135 537 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 VWA5B2Q8N398 1253 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 ESX1Q8N693 406 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 BMPERQ8N8U9 685 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 C17orf47Q8NEP4 570 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 OR5L2Q8NGL0 311 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 OR8K3Q8NH51 312 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 BBS10Q8TAM1 723 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 SUN3Q8TAQ9 357 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 WDR60Q8WVS4 1066 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 FIG4Q92562 907 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 CCDC124Q96CT7 223 aaKnown RBP6.54□□□□□ -1.36
SHQ1-207ENST00000475558 ITPKCQ96DU7 683 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 SLC35G5Q96KT7 338 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 MS4A4EQ96PG1 132 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 ZNF347Q96SE7 839 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 SLC39A3Q9BRY0 314 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 DOHHQ9BU89 302 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 G6PC3Q9BUM1 346 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 SIRT3Q9NTG7 399 aaPredicted RBP6.54□□□□□ -1.36
SHQ1-207ENST00000475558 OCIAD1Q9NX40 245 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 DHCR7Q9UBM7 475 aaKnown RBP6.54□□□□□ -1.36
SHQ1-207ENST00000475558 COPS7AQ9UBW8 275 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 ZNF639Q9UID6 485 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 KCND3Q9UK17 655 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 ERVK-11Q9UQG0 969 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 MRPS2Q9Y399 296 aaKnown RBP6.54□□□□□ -1.36
SHQ1-207ENST00000475558 FAM32AQ9Y421 112 aaKnown RBP6.54□□□□□ -1.36
SHQ1-207ENST00000475558 LRP4O75096 1905 aa6.54□□□□□ -1.36
SHQ1-207ENST00000475558 RELNP78509 3460 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 CACNA1DQ01668 2161 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 TCRBV16S1A1N1A0A5B0 115 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 ZNF860A6NHJ4 632 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 ENO4A6NNW6 628 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 C21orf140B9A014 251 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 C4orf51C9J302 202 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 FAM227AF5H4B4 570 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 H0YJX3 145 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 M0QX08 132 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 ARPC2O15144 300 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 LDB3O75112 727 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 DEAF1O75398 565 aaPredicted RBP6.53□□□□□ -1.36
SHQ1-207ENST00000475558 STX11O75558 287 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 KRT36O76013 467 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 PGM3O95394 542 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 HMGN2P05204 90 aaKnown RBP6.53□□□□□ -1.36
SHQ1-207ENST00000475558 C8orf89P0DMQ9 161 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 NAGAP17050 411 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 DRD5P21918 477 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 PPICP45877 212 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 CDK9P50750 372 aaKnown RBP6.53□□□□□ -1.36
SHQ1-207ENST00000475558 MVDP53602 400 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 RPS15P62841 145 aaKnown RBP6.53□□□□□ -1.36
SHQ1-207ENST00000475558 OLR1P78380 273 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 HPCAP84074 193 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 CCNIQ14094 377 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 SSPNQ14714 243 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 LARS2Q15031 903 aaKnown RBP6.53□□□□□ -1.36
SHQ1-207ENST00000475558 ADRM1Q16186 407 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 ARHGAP11BQ3KRB8 267 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 MINDY4Q4G0A6 757 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.53□□□□□ -1.36
SHQ1-207ENST00000475558 HLA-DQA1Q5Y7H0 255 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 HEPHL1Q6MZM0 1159 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 TMEM107Q6UX40 140 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 ZNF517Q6ZMY9 492 aaPredicted RBP6.53□□□□□ -1.36
SHQ1-207ENST00000475558 PIWIL3Q7Z3Z3 882 aaKnown RBP6.53□□□□□ -1.36
SHQ1-207ENST00000475558 ZZZ3Q8IYH5 903 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 DTWD1Q8N5C7 304 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 RNF148Q8N7C7 305 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 RCBTB1Q8NDN9 531 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 CHDHQ8NE62 594 aaPredicted RBP6.53□□□□□ -1.36
SHQ1-207ENST00000475558 ADCY4Q8NFM4 1077 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 TOR1AIP2Q8NFQ8 470 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 OR5T3Q8NGG3 340 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 OR9A2Q8NGT5 310 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 STT3BQ8TCJ2 826 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 SPPL2AQ8TCT8 520 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 SLC38A5Q8WUX1 472 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 NUDT8Q8WV74 236 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 APOBEC4Q8WW27 367 aaKnown RBP6.53□□□□□ -1.36
SHQ1-207ENST00000475558 SLC35B4Q969S0 331 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 TP53INP1Q96A56 240 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 KIAA1143Q96AT1 154 aaPredicted RBP6.53□□□□□ -1.36
SHQ1-207ENST00000475558 PPWD1Q96BP3 646 aaKnown RBP6.53□□□□□ -1.36
SHQ1-207ENST00000475558 NRBF2Q96F24 287 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 CENPNQ96H22 339 aaPredicted RBP6.53□□□□□ -1.36
SHQ1-207ENST00000475558 SENP5Q96HI0 755 aaPredicted RBP6.53□□□□□ -1.36
SHQ1-207ENST00000475558 FBXL20Q96IG2 436 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 LPAR4Q99677 370 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 LMF2Q9BU23 707 aaKnown RBP6.53□□□□□ -1.36
SHQ1-207ENST00000475558 CHID1Q9BWS9 393 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 PCDHAC1Q9H158 963 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 CHST8Q9H2A9 424 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 SYNPO2LQ9H987 977 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 Q9N2J8 555 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 SLAMF7Q9NQ25 335 aa6.53□□□□□ -1.36
SHQ1-207ENST00000475558 ZNF71Q9NQZ8 489 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms