RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 UCP1P25874 307 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 SOX6P35712 828 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 KRT6CP48668 564 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 PITPNBP48739 271 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 ERVPABLB-1P60509 514 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 ACTR1AP61163 376 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 CXCL6P80162 114 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 PDZK1IP1Q13113 114 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 HAGHQ16775 308 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 EPC2Q52LR7 807 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 C2orf66Q6UXQ4 117 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 DLEU7Q6UYE1 221 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 STHQ8IWL8 128 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 RDH11Q8TC12 318 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 SLC5A11Q8WWX8 675 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 BIRC7Q96CA5 298 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 MRPL53Q96EL3 112 aaKnown RBP4.56□□□□□ -1.68
SMC5-203ENST00000475540 PIWIL1Q96J94 861 aaKnown RBP4.56□□□□□ -1.68
SMC5-203ENST00000475540 OR5M11Q96RB7 305 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 TPPP3Q9BW30 176 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 CCSER1Q9C0I3 900 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 ACOXLQ9NUZ1 547 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 IL17CQ9P0M4 197 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 VPS54Q9P1Q0 977 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 PRODH2Q9UF12 536 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 EMCNQ9ULC0 261 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 SLC9A8Q9Y2E8 581 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 COL16A1Q07092 1604 aaPredicted RBP4.55□□□□□ -1.68
SMC5-203ENST00000475540 A0A087WZY1 265 aa4.55□□□□□ -1.68
SMC5-203ENST00000475540 A0A0A6YYD4 124 aa4.55□□□□□ -1.68
SMC5-203ENST00000475540 MACROD2A1Z1Q3 448 aa4.55□□□□□ -1.68
SMC5-203ENST00000475540 FAM220BPB1ANY3 271 aa4.55□□□□□ -1.68
SMC5-203ENST00000475540 GMFGO60234 142 aa4.55□□□□□ -1.68
SMC5-203ENST00000475540 SCGB2A1O75556 95 aa4.55□□□□□ -1.68
SMC5-203ENST00000475540 GJB5O95377 273 aa4.55□□□□□ -1.68
SMC5-203ENST00000475540 KRT8P05787 483 aa4.55□□□□□ -1.68
SMC5-203ENST00000475540 SFTPBP07988 381 aa4.55□□□□□ -1.68
SMC5-203ENST00000475540 PBLDP30039 288 aaPredicted RBP4.55□□□□□ -1.68
SMC5-203ENST00000475540 PRKAR2BP31323 418 aa4.55□□□□□ -1.68
SMC5-203ENST00000475540 ACADSBP45954 432 aa4.55□□□□□ -1.68
SMC5-203ENST00000475540 CNN1P51911 297 aaKnown RBP4.55□□□□□ -1.68
SMC5-203ENST00000475540 GBX2P52951 348 aaPredicted RBP4.55□□□□□ -1.68
SMC5-203ENST00000475540 SPP2Q13103 211 aa4.55□□□□□ -1.68
SMC5-203ENST00000475540 GK2Q14410 553 aaPredicted RBP4.55□□□□□ -1.68
SMC5-203ENST00000475540 SLC10A1Q14973 349 aa4.55□□□□□ -1.68
SMC5-203ENST00000475540 SHROOM1Q2M3G4 852 aaPredicted RBP4.55□□□□□ -1.68
SMC5-203ENST00000475540 LRRC23Q53EV4 343 aaPredicted RBP4.55□□□□□ -1.68
SMC5-203ENST00000475540 ARSKQ6UWY0 536 aa4.55□□□□□ -1.68
SMC5-203ENST00000475540 ASRGL1Q7L266 308 aa4.55□□□□□ -1.68
SMC5-203ENST00000475540 LEMD2Q8NC56 503 aa4.55□□□□□ -1.68
SMC5-203ENST00000475540 ERP44Q9BS26 406 aa4.55□□□□□ -1.68
SMC5-203ENST00000475540 TRIM9Q9C026 710 aa4.55□□□□□ -1.68
SMC5-203ENST00000475540 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.55□□□□□ -1.68
SMC5-203ENST00000475540 ADAM22Q9P0K1 906 aa4.55□□□□□ -1.68
SMC5-203ENST00000475540 CLIP2Q9UDT6 1046 aa4.55□□□□□ -1.68
SMC5-203ENST00000475540 ATP6V1G1O75348 118 aa4.54□□□□□ -1.68
SMC5-203ENST00000475540 SULT1E1P49888 294 aa4.54□□□□□ -1.68
SMC5-203ENST00000475540 NDST1P52848 882 aa4.54□□□□□ -1.68
SMC5-203ENST00000475540 MTTPP55157 894 aa4.54□□□□□ -1.68
SMC5-203ENST00000475540 RPS4XP62701 263 aaKnown RBP4.54□□□□□ -1.68
SMC5-203ENST00000475540 HERV-K104P63124 156 aa4.54□□□□□ -1.68
SMC5-203ENST00000475540 RIPK1Q13546 671 aa4.54□□□□□ -1.68
SMC5-203ENST00000475540 KLF5Q13887 457 aaPredicted RBP4.54□□□□□ -1.68
SMC5-203ENST00000475540 KIAA0040Q15053 153 aa4.54□□□□□ -1.68
SMC5-203ENST00000475540 KRT31Q15323 416 aa4.54□□□□□ -1.68
SMC5-203ENST00000475540 MAJINQ3KP22 176 aa4.54□□□□□ -1.68
SMC5-203ENST00000475540 STOX1Q6ZVD7 989 aa4.54□□□□□ -1.68
SMC5-203ENST00000475540 ARMCX2Q7L311 632 aa4.54□□□□□ -1.68
SMC5-203ENST00000475540 AMZ2Q86W34 360 aa4.54□□□□□ -1.68
SMC5-203ENST00000475540 TFB1MQ8WVM0 346 aaKnown RBP4.54□□□□□ -1.68
SMC5-203ENST00000475540 CTNNBL1Q8WYA6 563 aaPredicted RBP4.54□□□□□ -1.68
SMC5-203ENST00000475540 FAM173AQ9BQD7 235 aa4.54□□□□□ -1.68
SMC5-203ENST00000475540 DCLRE1BQ9H816 532 aa4.54□□□□□ -1.68
SMC5-203ENST00000475540 FANCFQ9NPI8 374 aa4.54□□□□□ -1.68
SMC5-203ENST00000475540 ERVK-18Q9QC07 812 aa4.54□□□□□ -1.68
SMC5-203ENST00000475540 DDX49Q9Y6V7 483 aaKnown RBP4.54□□□□□ -1.68
SMC5-203ENST00000475540 NCAPD2Q15021 1401 aa4.54□□□□□ -1.68
SMC5-203ENST00000475540 KDRP35968 1356 aa4.53□□□□□ -1.68
SMC5-203ENST00000475540 A8MX80 341 aa4.53□□□□□ -1.68
SMC5-203ENST00000475540 H0Y9J4 135 aa4.53□□□□□ -1.68
SMC5-203ENST00000475540 AP3B1O00203 1094 aa4.53□□□□□ -1.68
SMC5-203ENST00000475540 CYB561D2O14569 222 aa4.53□□□□□ -1.68
SMC5-203ENST00000475540 CHEK1O14757 476 aa4.53□□□□□ -1.68
SMC5-203ENST00000475540 SH2D1BO14796 132 aa4.53□□□□□ -1.68
SMC5-203ENST00000475540 IGHV3-9P01782 118 aa4.53□□□□□ -1.68
SMC5-203ENST00000475540 PVRP15151 417 aa4.53□□□□□ -1.68
SMC5-203ENST00000475540 OVGP1Q12889 678 aa4.53□□□□□ -1.68
SMC5-203ENST00000475540 TCHHL1Q5QJ38 904 aaPredicted RBP4.53□□□□□ -1.68
SMC5-203ENST00000475540 CCDC183Q5T5S1 534 aa4.53□□□□□ -1.68
SMC5-203ENST00000475540 CDC42EP5Q6NZY7 148 aa4.53□□□□□ -1.68
SMC5-203ENST00000475540 LPCAT2Q7L5N7 544 aa4.53□□□□□ -1.68
SMC5-203ENST00000475540 ZNF573Q86YE8 665 aa4.53□□□□□ -1.68
SMC5-203ENST00000475540 UNC5CLQ8IV45 518 aa4.53□□□□□ -1.68
SMC5-203ENST00000475540 Q8N9G6 341 aaPredicted RBP4.53□□□□□ -1.68
SMC5-203ENST00000475540 OR56B1Q8NGI3 324 aa4.53□□□□□ -1.68
SMC5-203ENST00000475540 U2AF1L4Q8WU68 220 aaKnown RBP4.53□□□□□ -1.68
SMC5-203ENST00000475540 CNDP1Q96KN2 507 aa4.53□□□□□ -1.68
SMC5-203ENST00000475540 GPR174Q9BXC1 333 aa4.53□□□□□ -1.68
SMC5-203ENST00000475540 PIGVQ9NUD9 493 aa4.53□□□□□ -1.68
SMC5-203ENST00000475540 RABL2AQ9UBK7 228 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms