RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 CLCA3PQ9Y6N3 262 aa3.21□□□□□ -1.9
SDHB-204ENST00000475049 SUPT6HQ7KZ85 1726 aaKnown RBP3.21□□□□□ -1.9
SDHB-204ENST00000475049 VWDEQ8N2E2 1590 aa3.21□□□□□ -1.9
SDHB-204ENST00000475049 ABCC4O15439 1325 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 FAM135BQ49AJ0 1406 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 IGHV3OR16-12A0A075B7B8 117 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 A0A087WWV3 80 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 ZNF840PA6NDX5 716 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 CCT8L1PA6NM43 557 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 EFCAB7A8K855 629 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 E2F3O00716 465 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 TYROBPO43914 113 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 SRPX2O60687 465 aaPredicted RBP3.2□□□□□ -1.9
SDHB-204ENST00000475049 ZNF354AO60765 605 aaPredicted RBP3.2□□□□□ -1.9
SDHB-204ENST00000475049 ZNF253O75346 499 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 PRAMEF12O95522 483 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 PTBP3O95758 552 aaKnown RBP3.2□□□□□ -1.9
SDHB-204ENST00000475049 PVRP15151 417 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 BCL3P20749 454 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 PTPN4P29074 926 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 MTTPP55157 894 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 IL9RQ01113 521 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 NAAAQ02083 359 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 ZNF85Q03923 595 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 SPP2Q13103 211 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 PNCKQ6P2M8 343 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 VPS36Q86VN1 386 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 ZSCAN30Q86W11 494 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 HPS6Q86YV9 775 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 ERC1Q8IUD2 1116 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 ARFGAP2Q8N6H7 521 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 DLX4Q92988 240 aaPredicted RBP3.2□□□□□ -1.9
SDHB-204ENST00000475049 NCLNQ969V3 563 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 WBP1Q96G27 269 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 CARD6Q9BX69 1037 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 YAE1D1Q9NRH1 226 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.2□□□□□ -1.9
SDHB-204ENST00000475049 STARD5Q9NSY2 213 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 DCAF13Q9NV06 445 aaKnown RBP3.2□□□□□ -1.9
SDHB-204ENST00000475049 GPR83Q9NYM4 423 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 GHRLQ9UBU3 117 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 RSPH14Q9UHP6 348 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 DHRS7Q9Y394 339 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 HCFC1P51610 2035 aa3.2□□□□□ -1.9
SDHB-204ENST00000475049 FHOD3Q2V2M9 1422 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 KDM5BQ9UGL1 1544 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 TTC26A0AVF1 554 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 NPIPA2E9PIF3 369 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.19□□□□□ -1.9
SDHB-204ENST00000475049 SAP18O00422 153 aaKnown RBP3.19□□□□□ -1.9
SDHB-204ENST00000475049 WNT2P09544 360 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 HOXB7P09629 217 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 GSTT2P0CG29 244 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 GSTT2BP0CG30 244 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 RRASP10301 218 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 PTPN6P29350 595 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 HTR5AP47898 357 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 ZNF33BQ06732 778 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 RUNX3Q13761 415 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 LTB4RQ15722 352 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 ZIC1Q15915 447 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 ZSWIM7Q19AV6 140 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 MICAQ29983 383 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 LRIT3Q3SXY7 679 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 TIMM50Q3ZCQ8 353 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 SLC25A30Q5SVS4 291 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 DMKNQ6E0U4 476 aaPredicted RBP3.19□□□□□ -1.9
SDHB-204ENST00000475049 ZCCHC12Q6PEW1 402 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 ZNF600Q6ZNG1 722 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 SERINC5Q86VE9 423 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 NAXDQ8IW45 347 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 FAM71CQ8NEG0 241 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 VN1R17PQ8TDU5 208 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 DNAJA3Q96EY1 480 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 PIWIL1Q96J94 861 aaKnown RBP3.19□□□□□ -1.9
SDHB-204ENST00000475049 C1orf147Q96MC9 270 aaPredicted RBP3.19□□□□□ -1.9
SDHB-204ENST00000475049 ANP32EQ9BTT0 268 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 WRAP53Q9BUR4 548 aaKnown RBP3.19□□□□□ -1.9
SDHB-204ENST00000475049 RWDD1Q9H446 243 aaPredicted RBP3.19□□□□□ -1.9
SDHB-204ENST00000475049 KAT8Q9H7Z6 458 aaKnown RBP3.19□□□□□ -1.9
SDHB-204ENST00000475049 ACTR8Q9H981 624 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 DUS2Q9NX74 493 aaKnown RBP3.19□□□□□ -1.9
SDHB-204ENST00000475049 CLEC5AQ9NY25 188 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 KLRF1Q9NZS2 232 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 ACTR3BQ9P1U1 418 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 P2RX2Q9UBL9 471 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 KDM5CP41229 1560 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 XIRP1Q702N8 1843 aaKnown RBP3.19□□□□□ -1.9
SDHB-204ENST00000475049 PHLPP1O60346 1717 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 SHANK3Q9BYB0 1731 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 CDK13Q14004 1512 aaKnown RBP3.19□□□□□ -1.9
SDHB-204ENST00000475049 ARHGEF12Q9NZN5 1544 aa3.19□□□□□ -1.9
SDHB-204ENST00000475049 PLA2R1Q13018 1463 aa3.18□□□□□ -1.9
SDHB-204ENST00000475049 FAM230AA0A1W2PPH8 454 aa3.18□□□□□ -1.9
SDHB-204ENST00000475049 ZSCAN5CA6NGD5 496 aaPredicted RBP3.18□□□□□ -1.9
SDHB-204ENST00000475049 ANKRD30BLA7E2S9 258 aa3.18□□□□□ -1.9
SDHB-204ENST00000475049 H3BTX0 84 aa3.18□□□□□ -1.9
SDHB-204ENST00000475049 PDLIM1O00151 329 aa3.18□□□□□ -1.9
SDHB-204ENST00000475049 LCMT2O60294 686 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms