RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 COX18Q8N8Q8 333 aa16.76■□□□□ 0.27
VARS2-206ENST00000473916 CDRT4Q8N9R6 151 aa16.76■□□□□ 0.27
VARS2-206ENST00000473916 OR4N2Q8NGD1 307 aa16.76■□□□□ 0.27
VARS2-206ENST00000473916 SLC7A13Q8TCU3 470 aa16.76■□□□□ 0.27
VARS2-206ENST00000473916 ARSGQ96EG1 525 aa16.76■□□□□ 0.27
VARS2-206ENST00000473916 HCN4Q9Y3Q4 1203 aa16.76■□□□□ 0.27
VARS2-206ENST00000473916 H0YIG0 161 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 PEX12O00623 359 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 ANXA8P13928 327 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 CRHBPP24387 322 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 FMO3P31513 532 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 GCGRP47871 477 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 RFX3P48380 749 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 EMDP50402 254 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 PGDP52209 483 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 NR1H2P55055 460 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 CCL7P80098 99 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 MAP4K2Q12851 820 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 CDK5R2Q13319 367 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 KEAP1Q14145 624 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 ZNF267Q14586 743 aaPredicted RBP16.75■□□□□ 0.27
VARS2-206ENST00000473916 C1orf189Q5VU69 101 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 ZNF836Q6ZNA1 936 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 PRR23CQ6ZRP0 262 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 FBLIM1Q8WUP2 373 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 RBM18Q96H35 190 aaKnown RBP16.75■□□□□ 0.27
VARS2-206ENST00000473916 ARHGDIGQ99819 225 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 FUZQ9BT04 418 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 CNPPD1Q9BV87 410 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 DUSP23Q9BVJ7 150 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 ZNF350Q9GZX5 532 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 SYNDIG1Q9H7V2 258 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 LANCL2Q9NS86 450 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 ZNF443Q9Y2A4 671 aaPredicted RBP16.75■□□□□ 0.27
VARS2-206ENST00000473916 NUP210LQ5VU65 1888 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 TRIM64CA6NLI5 447 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 M0R129 80 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 XPNPEP2O43895 674 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 PRKNO60260 465 aaPredicted RBP16.75■□□□□ 0.27
VARS2-206ENST00000473916 CDH2P19022 906 aaPredicted RBP16.75■□□□□ 0.27
VARS2-206ENST00000473916 RYKP34925 604 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 TRHRP34981 398 aaPredicted RBP16.75■□□□□ 0.27
VARS2-206ENST00000473916 FOXL2P58012 376 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 NNATQ16517 81 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 SMN1Q16637 294 aaKnown RBP16.75■□□□□ 0.27
VARS2-206ENST00000473916 PEAR1Q5VY43 1037 aaPredicted RBP16.75■□□□□ 0.27
VARS2-206ENST00000473916 KLHL17Q6TDP4 642 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 ZNF501Q96CX3 271 aaPredicted RBP16.75■□□□□ 0.27
VARS2-206ENST00000473916 DGAT2Q96PD7 388 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 PITX2Q99697 317 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 RHNO1Q9BSD3 238 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 YIPF3Q9GZM5 350 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 ZNF768Q9H5H4 540 aaKnown RBP16.75■□□□□ 0.27
VARS2-206ENST00000473916 FOLH1BQ9HBA9 442 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 DUSP22Q9NRW4 184 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 RASSF1Q9NS23 344 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 FGF21Q9NSA1 209 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 PAK1IP1Q9NWT1 392 aaPredicted RBP16.75■□□□□ 0.27
VARS2-206ENST00000473916 SLC6A14Q9UN76 642 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 PCDHGA6Q9Y5G7 932 aa16.75■□□□□ 0.27
VARS2-206ENST00000473916 A0A087WXM4 84 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 CPSF4LA6NMK7 179 aaKnown RBP16.74■□□□□ 0.27
VARS2-206ENST00000473916 CLDN4O14493 209 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 BCAS1O75363 584 aaPredicted RBP16.74■□□□□ 0.27
VARS2-206ENST00000473916 UGT2B17O75795 530 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 SLITRK5O94991 958 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 BMP10O95393 424 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 AGR2O95994 175 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 RPLP0P05388 317 aaKnown RBP16.74■□□□□ 0.27
VARS2-206ENST00000473916 HTR1AP08908 422 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 ALDH3B2P48448 385 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 HLCSP50747 726 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 PSG6Q00889 435 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 IL18R1Q13478 541 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 PODNL1Q6PEZ8 512 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 RBM44Q6ZP01 1051 aaKnown RBP16.74■□□□□ 0.27
VARS2-206ENST00000473916 C11orf74Q86VG3 221 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 MEX3DQ86XN8 651 aaKnown RBP16.74■□□□□ 0.27
VARS2-206ENST00000473916 TMEM151BQ8IW70 566 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 CARFQ8N187 725 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 DTWD2Q8NBA8 298 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 HDAC2Q92769 488 aaKnown RBP16.74■□□□□ 0.27
VARS2-206ENST00000473916 TSLPQ969D9 159 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 FAM192AQ9GZU8 254 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 ERVK-19Q9WJR5 959 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 POFUT2Q9Y2G5 429 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 SLC1A7O00341 560 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 IFNA16P05015 189 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 IGFBP1P08833 259 aaPredicted RBP16.74■□□□□ 0.27
VARS2-206ENST00000473916 EEF1B2P24534 225 aaKnown RBP16.74■□□□□ 0.27
VARS2-206ENST00000473916 PRKAR1BP31321 381 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 STT3AP46977 705 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 TUBA4AP68366 448 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 TRIM61Q5EBN2 209 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 DCST1Q5T197 706 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 NIPAL1Q6NVV3 410 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 ARHGAP22Q7Z5H3 698 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 B3GNT8Q7Z7M8 397 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 BPIFB6Q8NFQ5 453 aa16.74■□□□□ 0.27
VARS2-206ENST00000473916 ZC3H10Q96K80 434 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms