RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 CHD8Q9HCK8 2581 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 SYNJ2BP-COX16A0A087WUM0 186 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 A0A1W2PQ09 198 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 A0A1W2PR77 199 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 TMEM120BA0PK00 339 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 A6NCN8 305 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 ANKRD61A6NGH8 418 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 YJEFN3A6XGL0 299 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 A8MXQ7 604 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 ZNF487B1APH4 448 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 HMGB1P1B2RPK0 211 aaPredicted RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 KBTBD13C9JR72 458 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 ANKRD65E5RJM6 399 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 E7ENQ6 273 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 GOLGA8MH3BSY2 632 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 GAPDHSO14556 408 aaPredicted RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 CYB561D2O14569 222 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 SCAMP1O15126 338 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 ADAM12O43184 909 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 MED7O43513 233 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 CST8O60676 142 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 HUS1O60921 280 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 AVILO75366 819 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 DDHD2O94830 711 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 TTC4O95801 387 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 GAS8O95995 478 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 IFNB1P01574 187 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 THY1P04216 161 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 KRT7P08729 469 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 FAM200BP0CF97 657 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 CSH1P0DML2 217 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 CSH2P0DML3 217 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 P4HA1P13674 534 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 PDGFRAP16234 1089 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 ATF6P18850 670 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 BDNFP23560 247 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 PSMB4P28070 264 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 AXLP30530 894 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 SSTR1P30872 391 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 SDC4P31431 198 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 HPDP32754 393 aaPredicted RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 RDXP35241 583 aaKnown RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 RPL22P35268 128 aaKnown RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 ACTN2P35609 894 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 MDH1P40925 334 aaKnown RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 SOX3P41225 446 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 GRIA1P42261 906 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 MATKP42679 507 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 SSR1P43307 286 aaKnown RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 MAGEA4P43358 317 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 MAGEA6P43360 314 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 SLC11A1P49279 550 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 NUMBP49757 651 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 SUOXP51687 545 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 PDX1P52945 283 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 ACLYP53396 1101 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 MAP3K7CLP57077 242 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 EIF3EP60228 445 aaKnown RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 ARF3P61204 181 aaPredicted RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 MAGOHP61326 146 aaKnown RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 PRAMEP78395 509 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 CX3CL1P78423 397 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 ARF1P84077 181 aaKnown RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 MC1RQ01726 317 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 CREB5Q02930 508 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 CD300CQ08708 224 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 WASHC5Q12768 1159 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 ITGA7Q13683 1181 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 DPYSQ14117 519 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 PIGHQ14442 188 aaPredicted RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 SQLEQ14534 574 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 IHHQ14623 411 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 CRYMQ14894 314 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 MORF4L2Q15014 288 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 TMED2Q15363 201 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 MAPRE1Q15691 268 aaKnown RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 ZKSCAN8Q15776 578 aaPredicted RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 ZSCAN26Q16670 478 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 KYNUQ16719 465 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 KYAT1Q16773 422 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 PCGF3Q3KNV8 242 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 ANKRD20A8PQ5CZ79 823 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 TFDP3Q5H9I0 405 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 SPDYCQ5MJ68 293 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 RARS2Q5T160 578 aaKnown RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 ERMARDQ5T6L9 678 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 SDHAF4Q5VUM1 108 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 SYPL2Q5VXT5 272 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 MFSD14CQ5VZR4 134 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 CES4AQ5XG92 561 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 FAM219BQ5XKK7 198 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 ITPRIPL1Q6GPH6 555 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 PPP1R2P3Q6NXS1 205 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 TMEM154Q6P9G4 183 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 LINGO4Q6UY18 593 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 C4orf50Q6ZRC1 276 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 TRMT10CQ7L0Y3 403 aaKnown RBP1.29□□□□□ -2.2
CCDC39-203ENST00000473854 ARCQ7LC44 396 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 STRADAQ7RTN6 431 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 SZRD1Q7Z422 152 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms