RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 CHRNGP07510 517 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 FCGR1AP12314 374 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 KRT5P13647 590 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 DAOP14920 347 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 GOT1P17174 413 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 CCNA2P20248 432 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 NMT1P30419 496 aaKnown RBP2.1□□□□□ -2.07
CALD1-216ENST00000473714 ARRB2P32121 409 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 CHRNA3P32297 505 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 CD86P42081 329 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 SLC1A3P43003 542 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 HOXA1P49639 335 aaPredicted RBP2.1□□□□□ -2.07
CALD1-216ENST00000473714 VAMP7P51809 220 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 THOP1P52888 689 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 SLC26A5P58743 744 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 TUBA1BP68363 451 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 CSNK1G2P78368 415 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 HTD2P86397 168 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 MAT1AQ00266 395 aaKnown RBP2.1□□□□□ -2.07
CALD1-216ENST00000473714 PRKCEQ02156 737 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 Q0VFX4 171 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 GTF3C1Q12789 2109 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 PNRC1Q12796 327 aaPredicted RBP2.1□□□□□ -2.07
CALD1-216ENST00000473714 DLG1Q12959 904 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 SNTA1Q13424 505 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 GAMTQ14353 236 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 ZNF235Q14590 738 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 TPD52L1Q16890 204 aaPredicted RBP2.1□□□□□ -2.07
CALD1-216ENST00000473714 ZC2HC1CQ53FD0 456 aaPredicted RBP2.1□□□□□ -2.07
CALD1-216ENST00000473714 SIRPB2Q5JXA9 342 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 SLC35D3Q5M8T2 416 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 C20orf194Q5TEA3 1177 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 ATF7IP2Q5U623 682 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 UGT3A1Q6NUS8 523 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 IRGCQ6NXR0 463 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 BTNL8Q6UX41 500 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 GFRALQ6UXV0 394 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 UNQ6126/PRO20091Q6UXV3 157 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 B3GLCTQ6Y288 498 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 TMEM150AQ86TG1 271 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 ASPGQ86U10 573 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 ITIH5Q86UX2 942 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 TMEM219Q86XT9 240 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 CACUL1Q86Y37 369 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 HIPK1Q86Z02 1210 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 APLFQ8IW19 511 aaPredicted RBP2.1□□□□□ -2.07
CALD1-216ENST00000473714 IQCKQ8N0W5 287 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 CIARTQ8N365 385 aaPredicted RBP2.1□□□□□ -2.07
CALD1-216ENST00000473714 PRSS35Q8N3Z0 413 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 LRRC17Q8N6Y2 441 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 DMBX1Q8NFW5 382 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 OR13A1Q8NGR1 328 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 OR4A16Q8NH70 328 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 LILRB1Q8NHL6 650 aaPredicted RBP2.1□□□□□ -2.07
CALD1-216ENST00000473714 ZNF473Q8WTR7 871 aaKnown RBP2.1□□□□□ -2.07
CALD1-216ENST00000473714 PHLDA1Q8WV24 401 aaPredicted RBP2.1□□□□□ -2.07
CALD1-216ENST00000473714 IGFBPL1Q8WX77 278 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 GGHQ92820 318 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 TMEM159Q96B96 161 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 LGALS12Q96DT0 336 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 BICD1Q96G01 975 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 ZNF583Q96ND8 569 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 KCNK16Q96T55 309 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 EPYCQ99645 322 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 MEIS3Q99687 375 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 PSD2Q9BQI7 771 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 TMEM121Q9BTD3 319 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 ANP32EQ9BTT0 268 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 CARD6Q9BX69 1037 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 STRADBQ9C0K7 418 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 CSTL1Q9H114 145 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 UBQLN3Q9H347 655 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 LIME1Q9H400 295 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 ACTL8Q9H568 366 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 MARCH7Q9H992 704 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 EBF2Q9HAK2 575 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 MAGEF1Q9HAY2 307 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 LY9Q9HBG7 655 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 C3orf14Q9HBI5 128 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 A4GALTQ9NPC4 353 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 ZNF302Q9NR11 478 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 GPR173Q9NS66 373 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 FGF21Q9NSA1 209 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 HOMER3Q9NSC5 361 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 TAS2R3Q9NYW6 316 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 SPASTQ9UBP0 616 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 FAM153AQ9UHL3 310 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 TRMT6Q9UJA5 497 aaKnown RBP2.1□□□□□ -2.07
CALD1-216ENST00000473714 STUB1Q9UNE7 303 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 KCNK6Q9Y257 313 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 SH3GLB1Q9Y371 365 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 UBIAD1Q9Y5Z9 338 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 CLCA3PQ9Y6N3 262 aa2.1□□□□□ -2.07
CALD1-216ENST00000473714 INTS1Q8N201 2190 aaKnown RBP2.1□□□□□ -2.07
CALD1-216ENST00000473714 USF3Q68DE3 2245 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 IGLV5-45A0A087WSX0 123 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 A0A087X0K7 114 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.09□□□□□ -2.07
CALD1-216ENST00000473714 TEX13DA0A0J9YY54 714 aaPredicted RBP2.09□□□□□ -2.07
CALD1-216ENST00000473714 FEZF1A0PJY2 475 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms