RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 OR14C36Q8NHC7 312 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 HUS1BQ8NHY5 278 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 SLAMF9Q96A28 289 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 SLC25A46Q96AG3 418 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 ORAI1Q96D31 301 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF419Q96HQ0 510 aaPredicted RBP4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 CPB2Q96IY4 423 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 KIRREL1Q96J84 757 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 RPL10LQ96L21 214 aaKnown RBP4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 MSTO1Q9BUK6 570 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 TOLLIPQ9H0E2 274 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 OR51B6Q9H340 312 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 PPP1R3EQ9H7J1 279 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 ACTR8Q9H981 624 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 TMEM45AQ9NWC5 275 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 MRTO4Q9UKD2 239 aaKnown RBP4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 V9GYQ6 96 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 LOC102723532A0A0G2JNH3 316 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 GNG14A0A1W2PPG7 69 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 A0A1W2PQL4 384 aaPredicted RBP4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 OR14I1A6ND48 311 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 NEMP2A6NFY4 417 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 OR6C75A6NL08 312 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 ITGB1BP1O14713 200 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 EEDO75530 441 aaKnown RBP4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 AQP8O94778 261 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 PCDH8O95206 1070 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 STBD1O95210 358 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 IGHV2-5P01817 119 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 PAX1P15863 534 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 PPP3CBP16298 524 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 IL1RNP18510 177 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 GGT1P19440 569 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 HIBADHP31937 336 aaKnown RBP4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 PBX3P40426 434 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 PMELP40967 661 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 VSX2P58304 361 aaPredicted RBP4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 RPL7AP62424 266 aaKnown RBP4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 SLC25A11Q02978 314 aaKnown RBP4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 ELAVL2Q12926 359 aaKnown RBP4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 PDZK1IP1Q13113 114 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 CDH18Q13634 790 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 ARHGAP19Q14CB8 494 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 UBXN2BQ14CS0 331 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNHIT3Q15649 155 aaPredicted RBP4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 SPIN4Q56A73 249 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 RABL3Q5HYI8 236 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 C3orf38Q5JPI3 329 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 SPANXN3Q5MJ09 141 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 BCL2L15Q5TBC7 163 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 ARHGAP40Q5TG30 622 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 TXNRD3NBQ6F5E7 133 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 MSANTD2Q6P1R3 559 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 BAIAP2L2Q6UXY1 529 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 PYROXD2Q8N2H3 581 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 FAM26EQ8N5C1 309 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 ATP6V1C2Q8NEY4 427 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 PXT1Q8NFP0 134 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 OR2T35Q8NGX2 323 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 POF1BQ8WVV4 589 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 MAFIPQ8WZ33 124 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 BSCL2Q96G97 398 aaPredicted RBP4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 SPATA5L1Q9BVQ7 753 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 TAPBPLQ9BX59 468 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 ARHGAP39Q9C0H5 1083 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 PIGMQ9H3S5 423 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 MTG2Q9H4K7 406 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 DHX35Q9H5Z1 703 aaKnown RBP4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 LEF1Q9UJU2 399 aaPredicted RBP4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 A0A087X0M5 115 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 A0A1B0GX30 115 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 A0A1W2PPC1 479 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 PLSCR5A0PG75 271 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 WDR27A2RRH5 827 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 URADA6NGE7 173 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 ERI2A8K979 691 aaKnown RBP4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 MYO1GB0I1T2 1018 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 BLOC1S5-TXNDC5H3BN57 136 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 M0QZ92 97 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 IMPA2O14732 288 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 HCRTR2O43614 444 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 FADS1O60427 444 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 PRAMEF2O60811 474 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 SC5DO75845 299 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 BEST1O76090 585 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 SBK3P0C264 359 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 RD3LP0DJH9 198 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 OR8G3PP0DMU2 310 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 HIST1H1BP16401 226 aaKnown RBP4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 CSRP3P50461 194 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 ITGA1P56199 1179 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 OR4D2P58180 307 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 SEMG2Q02383 582 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF543Q08ER8 600 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 P2RY14Q15391 338 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 RNASE10Q5GAN6 216 aaKnown RBP4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 RIPPLY2Q5TAB7 128 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 HACD4Q5VWC8 232 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 SCIMPQ6UWF3 145 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 GALNT5Q7Z7M9 940 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms