RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 SLC44A2Q8IWA5 706 aaPredicted RBP13.89□□□□□ -0.19
VTI1A-203ENST00000472892 GSPT2Q8IYD1 628 aaKnown RBP13.89□□□□□ -0.19
VTI1A-203ENST00000472892 C9orf106Q8NAJ2 232 aa13.89□□□□□ -0.19
VTI1A-203ENST00000472892 NRGNQ92686 78 aa13.89□□□□□ -0.19
VTI1A-203ENST00000472892 TUBA1CQ9BQE3 449 aa13.89□□□□□ -0.19
VTI1A-203ENST00000472892 POLDIP3Q9BY77 421 aaKnown RBP13.89□□□□□ -0.19
VTI1A-203ENST00000472892 PPCSQ9HAB8 311 aa13.89□□□□□ -0.19
VTI1A-203ENST00000472892 TNFRSF12AQ9NP84 129 aa13.89□□□□□ -0.19
VTI1A-203ENST00000472892 MYNNQ9NPC7 610 aa13.89□□□□□ -0.19
VTI1A-203ENST00000472892 RASSF1Q9NS23 344 aa13.89□□□□□ -0.19
VTI1A-203ENST00000472892 OXSMQ9NWU1 459 aa13.89□□□□□ -0.19
VTI1A-203ENST00000472892 SENP1Q9P0U3 644 aa13.89□□□□□ -0.19
VTI1A-203ENST00000472892 FBXL2Q9UKC9 423 aa13.89□□□□□ -0.19
VTI1A-203ENST00000472892 C19orf53Q9UNZ5 99 aaPredicted RBP13.89□□□□□ -0.19
VTI1A-203ENST00000472892 CCL27Q9Y4X3 112 aa13.89□□□□□ -0.19
VTI1A-203ENST00000472892 RSL1D1O76021 490 aaKnown RBP13.88□□□□□ -0.19
VTI1A-203ENST00000472892 RCBTB2O95199 551 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 PSMG1O95456 288 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 JUNP05412 331 aaKnown RBP13.88□□□□□ -0.19
VTI1A-203ENST00000472892 CPA3P15088 417 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 CD1EP15812 388 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 IL12BP29460 328 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 STARP49675 285 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 LHX2P50458 406 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 NCBP2P52298 156 aaKnown RBP eCLIP13.88□□□□□ -0.19
VTI1A-203ENST00000472892 AGFG1P52594 562 aaKnown RBP13.88□□□□□ -0.19
VTI1A-203ENST00000472892 IST1P53990 364 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 MRPS22P82650 360 aaKnown RBP13.88□□□□□ -0.19
VTI1A-203ENST00000472892 KIAA0040Q15053 153 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 IMPG1Q17R60 797 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 CYP27C1Q4G0S4 372 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 FLYWCH1Q4VC44 716 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 NOXRED1Q6NXP6 359 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 AAGABQ6PD74 315 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 LRRN4CLQ8ND94 238 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 RDH11Q8TC12 318 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 WNT2BQ93097 391 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 EFHD2Q96C19 240 aaPredicted RBP13.88□□□□□ -0.19
VTI1A-203ENST00000472892 DTNBP1Q96EV8 351 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 METTL2AQ96IZ6 378 aaKnown RBP13.88□□□□□ -0.19
VTI1A-203ENST00000472892 TM9SF2Q99805 663 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 G6PC3Q9BUM1 346 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 KRTAP3-3Q9BYR6 98 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 KRTAP3-2Q9BYR7 98 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 GLIPR2Q9H4G4 154 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 MIEF1Q9NQG6 463 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 RRAGDQ9NQL2 400 aaPredicted RBP13.88□□□□□ -0.19
VTI1A-203ENST00000472892 OR10H1Q9Y4A9 318 aa13.88□□□□□ -0.19
VTI1A-203ENST00000472892 KIAA1549Q9HCM3 1950 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 A6NNC1 897 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 B4DXG7 233 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 NPIPB8E9PQR5 432 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 H0Y3Z8 333 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 UPK1AO00322 258 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 COQ9O75208 318 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 CRCPO75575 148 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 TMIGD3P0DMS9 266 aaPredicted RBP13.87□□□□□ -0.19
VTI1A-203ENST00000472892 UROSP10746 265 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 PRPH2P23942 346 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 CHMP24386 653 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 GRK2P25098 689 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 MC3RP41968 323 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 DGKQP52824 942 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 ART1P52961 327 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 CLDN18P56856 261 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 SRYQ05066 204 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 FOXF2Q12947 444 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 CFAP157Q5JU67 520 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 OR5M10Q6IEU7 315 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 TMEM107Q6UX40 140 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 IKBIPQ70UQ0 350 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 KIF18BQ86Y91 864 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 OR2L13Q8N349 312 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 CDC26Q8NHZ8 85 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 NINJ1Q92982 152 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 ELP4Q96EB1 424 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 ZFP3Q96NJ6 502 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 AMDHD1Q96NU7 426 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 GPATCH1Q9BRR8 931 aaKnown RBP13.87□□□□□ -0.19
VTI1A-203ENST00000472892 CLEC4MQ9H2X3 399 aaPredicted RBP13.87□□□□□ -0.19
VTI1A-203ENST00000472892 C12orf65Q9H3J6 166 aaKnown RBP13.87□□□□□ -0.19
VTI1A-203ENST00000472892 CBLCQ9ULV8 474 aa13.87□□□□□ -0.19
VTI1A-203ENST00000472892 POLR3HQ9Y535 204 aaPredicted RBP13.87□□□□□ -0.19
VTI1A-203ENST00000472892 TUBAL3A6NHL2 446 aa13.86□□□□□ -0.19
VTI1A-203ENST00000472892 CLCA1A8K7I4 914 aa13.86□□□□□ -0.19
VTI1A-203ENST00000472892 FADS1O60427 444 aa13.86□□□□□ -0.19
VTI1A-203ENST00000472892 IFI6P09912 130 aa13.86□□□□□ -0.19
VTI1A-203ENST00000472892 EPXP11678 715 aa13.86□□□□□ -0.19
VTI1A-203ENST00000472892 ZNF708P17019 499 aa13.86□□□□□ -0.19
VTI1A-203ENST00000472892 DPP4P27487 766 aa13.86□□□□□ -0.19
VTI1A-203ENST00000472892 DSCR4P56555 118 aaPredicted RBP13.86□□□□□ -0.19
VTI1A-203ENST00000472892 RIPPLY3P57055 190 aa13.86□□□□□ -0.19
VTI1A-203ENST00000472892 B3GALT5-AS1P59052 145 aa13.86□□□□□ -0.19
VTI1A-203ENST00000472892 SORDQ00796 357 aa13.86□□□□□ -0.19
VTI1A-203ENST00000472892 SLC18A2Q05940 514 aa13.86□□□□□ -0.19
VTI1A-203ENST00000472892 ZNF155Q12901 538 aaPredicted RBP13.86□□□□□ -0.19
VTI1A-203ENST00000472892 GAB1Q13480 694 aa13.86□□□□□ -0.19
VTI1A-203ENST00000472892 BCL2A1Q16548 175 aa13.86□□□□□ -0.19
VTI1A-203ENST00000472892 FADS6Q8N9I5 356 aa13.86□□□□□ -0.19
VTI1A-203ENST00000472892 UBLCP1Q8WVY7 318 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms