RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 PLA2G4CQ9UP65 541 aa4.07□□□□□ -1.76
CLK1-209ENST00000472679 METP08581 1390 aa4.06□□□□□ -1.76
CLK1-209ENST00000472679 H0YL77 283 aa4.06□□□□□ -1.76
CLK1-209ENST00000472679 DUX4L4P0CJ87 422 aa4.06□□□□□ -1.76
CLK1-209ENST00000472679 ZNF19P17023 458 aa4.06□□□□□ -1.76
CLK1-209ENST00000472679 ACVR1BP36896 505 aa4.06□□□□□ -1.76
CLK1-209ENST00000472679 XCR1P46094 333 aa4.06□□□□□ -1.76
CLK1-209ENST00000472679 RPS6P62753 249 aaKnown RBP4.06□□□□□ -1.76
CLK1-209ENST00000472679 MRPS6P82932 125 aaKnown RBP4.06□□□□□ -1.76
CLK1-209ENST00000472679 SERTAD2Q14140 314 aa4.06□□□□□ -1.76
CLK1-209ENST00000472679 RAB35Q15286 201 aa4.06□□□□□ -1.76
CLK1-209ENST00000472679 SLC22A10Q63ZE4 541 aa4.06□□□□□ -1.76
CLK1-209ENST00000472679 OLFML2AQ68BL7 652 aa4.06□□□□□ -1.76
CLK1-209ENST00000472679 LEG1Q6P5S2 330 aa4.06□□□□□ -1.76
CLK1-209ENST00000472679 P4HA3Q7Z4N8 544 aa4.06□□□□□ -1.76
CLK1-209ENST00000472679 ERICH1Q86X53 443 aa4.06□□□□□ -1.76
CLK1-209ENST00000472679 FBXO16Q8IX29 292 aaPredicted RBP4.06□□□□□ -1.76
CLK1-209ENST00000472679 GPR65Q8IYL9 337 aa4.06□□□□□ -1.76
CLK1-209ENST00000472679 DQX1Q8TE96 717 aaKnown RBP4.06□□□□□ -1.76
CLK1-209ENST00000472679 U2AF1L4Q8WU68 220 aaKnown RBP4.06□□□□□ -1.76
CLK1-209ENST00000472679 OPN3Q9H1Y3 402 aaPredicted RBP4.06□□□□□ -1.76
CLK1-209ENST00000472679 DUS2Q9NX74 493 aaKnown RBP4.06□□□□□ -1.76
CLK1-209ENST00000472679 GDAP2Q9NXN4 497 aa4.06□□□□□ -1.76
CLK1-209ENST00000472679 GHRLQ9UBU3 117 aa4.06□□□□□ -1.76
CLK1-209ENST00000472679 TRBV7-9A0A0J9YWB2 115 aa4.05□□□□□ -1.76
CLK1-209ENST00000472679 FBLL1A6NHQ2 334 aaKnown RBP4.05□□□□□ -1.76
CLK1-209ENST00000472679 FAM220BPB1ANY3 271 aa4.05□□□□□ -1.76
CLK1-209ENST00000472679 HAT1O14929 419 aa4.05□□□□□ -1.76
CLK1-209ENST00000472679 NUDT21O43809 227 aaKnown RBP4.05□□□□□ -1.76
CLK1-209ENST00000472679 MT-ATP6P00846 226 aa4.05□□□□□ -1.76
CLK1-209ENST00000472679 SLC35G4P0C7Q5 338 aa4.05□□□□□ -1.76
CLK1-209ENST00000472679 P0C879 139 aa4.05□□□□□ -1.76
CLK1-209ENST00000472679 CCDC192P0DO97 292 aa4.05□□□□□ -1.76
CLK1-209ENST00000472679 ETS1P14921 441 aa4.05□□□□□ -1.76
CLK1-209ENST00000472679 SDC1P18827 310 aa4.05□□□□□ -1.76
CLK1-209ENST00000472679 TSPAN8P19075 237 aa4.05□□□□□ -1.76
CLK1-209ENST00000472679 PTPN6P29350 595 aa4.05□□□□□ -1.76
CLK1-209ENST00000472679 HERVK_113P63132 956 aa4.05□□□□□ -1.76
CLK1-209ENST00000472679 ERVK-8P63133 956 aa4.05□□□□□ -1.76
CLK1-209ENST00000472679 SNX1Q13596 522 aa4.05□□□□□ -1.76
CLK1-209ENST00000472679 GAMTQ14353 236 aa4.05□□□□□ -1.76
CLK1-209ENST00000472679 LGSNQ5TDP6 509 aa4.05□□□□□ -1.76
CLK1-209ENST00000472679 DMKNQ6E0U4 476 aaPredicted RBP4.05□□□□□ -1.76
CLK1-209ENST00000472679 OLFM4Q6UX06 510 aa4.05□□□□□ -1.76
CLK1-209ENST00000472679 UBQLNLQ8IYU4 475 aa4.05□□□□□ -1.76
CLK1-209ENST00000472679 ART4Q93070 314 aa4.05□□□□□ -1.76
CLK1-209ENST00000472679 SLC25A36Q96CQ1 311 aa4.05□□□□□ -1.76
CLK1-209ENST00000472679 SPXQ9BT56 116 aa4.05□□□□□ -1.76
CLK1-209ENST00000472679 ERVK-6Q9BXR3 956 aa4.05□□□□□ -1.76
CLK1-209ENST00000472679 TMEM231Q9H6L2 316 aa4.05□□□□□ -1.76
CLK1-209ENST00000472679 ZNF490Q9ULM2 529 aaPredicted RBP4.05□□□□□ -1.76
CLK1-209ENST00000472679 LATO43561 262 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 NOL4O94818 638 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 TGFAP01135 160 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 ZBTB25P24278 435 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 PTBP1P26599 531 aaKnown RBP eCLIP4.04□□□□□ -1.76
CLK1-209ENST00000472679 HTR5AP47898 357 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 SLC26A5P58743 744 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 PUDPQ08623 228 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 CD47Q08722 323 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 PDIA5Q14554 519 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 KIAA0040Q15053 153 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 TTC31Q49AM3 519 aaPredicted RBP4.04□□□□□ -1.76
CLK1-209ENST00000472679 LDLRAP1Q5SW96 308 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 C9orf129Q5T035 196 aaKnown RBP4.04□□□□□ -1.76
CLK1-209ENST00000472679 ZNF57Q68EA5 555 aaPredicted RBP4.04□□□□□ -1.76
CLK1-209ENST00000472679 SLC39A4Q6P5W5 647 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 NET1Q7Z628 596 aaPredicted RBP4.04□□□□□ -1.76
CLK1-209ENST00000472679 PARGQ86W56 976 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 ZNF677Q86XU0 584 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 RNF148Q8N7C7 305 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 MINDY2Q8NBR6 621 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 ADIPOR1Q96A54 375 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 TEX13BQ9BXU2 312 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 ELOVL4Q9GZR5 314 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 ATG10Q9H0Y0 220 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 EXOSC3Q9NQT5 275 aaKnown RBP4.04□□□□□ -1.76
CLK1-209ENST00000472679 ELOVL2Q9NXB9 296 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.04□□□□□ -1.76
CLK1-209ENST00000472679 KLRF1Q9NZS2 232 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 P2RX2Q9UBL9 471 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 PLEKHA6Q9Y2H5 1048 aa4.04□□□□□ -1.76
CLK1-209ENST00000472679 EXOSC1Q9Y3B2 195 aaKnown RBP4.04□□□□□ -1.76
CLK1-209ENST00000472679 UBE4BO95155 1302 aa4.03□□□□□ -1.76
CLK1-209ENST00000472679 TTC26A0AVF1 554 aa4.03□□□□□ -1.76
CLK1-209ENST00000472679 E7ENQ6 273 aa4.03□□□□□ -1.76
CLK1-209ENST00000472679 E9PMD0 336 aa4.03□□□□□ -1.76
CLK1-209ENST00000472679 SGK494L7N484 410 aa4.03□□□□□ -1.76
CLK1-209ENST00000472679 CDX4O14627 284 aaPredicted RBP4.03□□□□□ -1.76
CLK1-209ENST00000472679 ALOX15BO15296 676 aa4.03□□□□□ -1.76
CLK1-209ENST00000472679 NDUFA7O95182 113 aa4.03□□□□□ -1.76
CLK1-209ENST00000472679 IGFBP1P08833 259 aaPredicted RBP4.03□□□□□ -1.76
CLK1-209ENST00000472679 RALAP11233 206 aa4.03□□□□□ -1.76
CLK1-209ENST00000472679 STMN1P16949 149 aa4.03□□□□□ -1.76
CLK1-209ENST00000472679 IGHV1-2P23083 117 aa4.03□□□□□ -1.76
CLK1-209ENST00000472679 RABIFP47224 123 aa4.03□□□□□ -1.76
CLK1-209ENST00000472679 GABPB1Q06547 395 aaPredicted RBP4.03□□□□□ -1.76
CLK1-209ENST00000472679 NFAM1Q8NET5 270 aaPredicted RBP4.03□□□□□ -1.76
CLK1-209ENST00000472679 OR13F1Q8NGS4 319 aa4.03□□□□□ -1.76
CLK1-209ENST00000472679 ADAMTS16Q8TE57 1224 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms