RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, human

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGCE-210	ENST00000472326	PNP	P00491	289 aa		4.63	□□□□□ -1.67
SGCE-210	ENST00000472326	ZCCHC18	P0CG32	403 aa		4.63	□□□□□ -1.67
SGCE-210	ENST00000472326	CPN1	P15169	458 aa		4.63	□□□□□ -1.67
SGCE-210	ENST00000472326	OR3A4P	P47883	348 aa		4.63	□□□□□ -1.67
SGCE-210	ENST00000472326	STK19	P49842	368 aa	Predicted RBP	4.63	□□□□□ -1.67
SGCE-210	ENST00000472326	NT5C2	P49902	561 aa		4.63	□□□□□ -1.67
SGCE-210	ENST00000472326	RAB35	Q15286	201 aa		4.63	□□□□□ -1.67
SGCE-210	ENST00000472326	HERC4	Q5GLZ8	1057 aa	Predicted RBP	4.63	□□□□□ -1.67
SGCE-210	ENST00000472326	CCDC43	Q96MW1	224 aa	Known RBP	4.63	□□□□□ -1.67
SGCE-210	ENST00000472326	DPH7	Q9BTV6	452 aa		4.63	□□□□□ -1.67
SGCE-210	ENST00000472326	LAT	O43561	262 aa		4.62	□□□□□ -1.67
SGCE-210	ENST00000472326	KERA	O60938	352 aa		4.62	□□□□□ -1.67
SGCE-210	ENST00000472326	TOX	O94900	526 aa		4.62	□□□□□ -1.67
SGCE-210	ENST00000472326	PGK2	P07205	417 aa		4.62	□□□□□ -1.67
SGCE-210	ENST00000472326	CAPRIN1	Q14444	709 aa	Known RBP	4.62	□□□□□ -1.67
SGCE-210	ENST00000472326	BEND6	Q5SZJ8	279 aa	Predicted RBP	4.62	□□□□□ -1.67
SGCE-210	ENST00000472326	MEDAG	Q5VYS4	303 aa		4.62	□□□□□ -1.67
SGCE-210	ENST00000472326	ZNF57	Q68EA5	555 aa	Predicted RBP	4.62	□□□□□ -1.67
SGCE-210	ENST00000472326	PARG	Q86W56	976 aa		4.62	□□□□□ -1.67
SGCE-210	ENST00000472326	C9orf40	Q8IXQ3	194 aa		4.62	□□□□□ -1.67
SGCE-210	ENST00000472326	NEK11	Q8NG66	645 aa		4.62	□□□□□ -1.67
SGCE-210	ENST00000472326	EXOC6	Q8TAG9	804 aa		4.62	□□□□□ -1.67
SGCE-210	ENST00000472326	FRAT1	Q92837	279 aa	Predicted RBP	4.62	□□□□□ -1.67
SGCE-210	ENST00000472326	C16orf74	Q96GX8	76 aa		4.62	□□□□□ -1.67
SGCE-210	ENST00000472326	TECTB	Q96PL2	329 aa		4.62	□□□□□ -1.67
SGCE-210	ENST00000472326	NDUFAF3	Q9BU61	184 aa		4.62	□□□□□ -1.67
SGCE-210	ENST00000472326	C19orf24	Q9BVV8	132 aa		4.62	□□□□□ -1.67
SGCE-210	ENST00000472326	CARD6	Q9BX69	1037 aa		4.62	□□□□□ -1.67
SGCE-210	ENST00000472326	NMUR2	Q9GZQ4	415 aa		4.62	□□□□□ -1.67
SGCE-210	ENST00000472326	ZNF702P	Q9H963	129 aa		4.62	□□□□□ -1.67
SGCE-210	ENST00000472326	HOMER3	Q9NSC5	361 aa		4.62	□□□□□ -1.67
SGCE-210	ENST00000472326	ELOVL2	Q9NXB9	296 aa		4.62	□□□□□ -1.67
SGCE-210	ENST00000472326	TRBV2	A0A0J9YWF9	115 aa		4.61	□□□□□ -1.67
SGCE-210	ENST00000472326	IMPA2	O14732	288 aa		4.61	□□□□□ -1.67
SGCE-210	ENST00000472326	STAM2	O75886	525 aa		4.61	□□□□□ -1.67
SGCE-210	ENST00000472326	SERF1A	O75920	110 aa		4.61	□□□□□ -1.67
SGCE-210	ENST00000472326	OLFM2	O95897	454 aa		4.61	□□□□□ -1.67
SGCE-210	ENST00000472326	MGMT	P16455	207 aa		4.61	□□□□□ -1.67
SGCE-210	ENST00000472326	MAGEA4	P43358	317 aa		4.61	□□□□□ -1.67
SGCE-210	ENST00000472326	DIO3	P55073	304 aa		4.61	□□□□□ -1.67
SGCE-210	ENST00000472326	CAMK4	Q16566	473 aa		4.61	□□□□□ -1.67
SGCE-210	ENST00000472326	ACSF3	Q4G176	576 aa	Predicted RBP	4.61	□□□□□ -1.67
SGCE-210	ENST00000472326	LCE3A	Q5TA76	89 aa		4.61	□□□□□ -1.67
SGCE-210	ENST00000472326	UFSP1	Q6NVU6	142 aa		4.61	□□□□□ -1.67
SGCE-210	ENST00000472326	HACD2	Q6Y1H2	254 aa		4.61	□□□□□ -1.67
SGCE-210	ENST00000472326	C14orf178	Q8N769	122 aa	Predicted RBP	4.61	□□□□□ -1.67
SGCE-210	ENST00000472326	CCNY	Q8ND76	341 aa		4.61	□□□□□ -1.67
SGCE-210	ENST00000472326	WDR36	Q8NI36	951 aa	Known RBP	4.61	□□□□□ -1.67
SGCE-210	ENST00000472326	ADAMTS16	Q8TE57	1224 aa		4.61	□□□□□ -1.67
SGCE-210	ENST00000472326	NACA2	Q9H009	215 aa		4.61	□□□□□ -1.67
SGCE-210	ENST00000472326	MTRR	Q9UBK8	725 aa		4.61	□□□□□ -1.67
SGCE-210	ENST00000472326	APPL1	Q9UKG1	709 aa		4.61	□□□□□ -1.67
SGCE-210	ENST00000472326	TNR	Q92752	1358 aa		4.61	□□□□□ -1.67
SGCE-210	ENST00000472326	FAM231B	A6NCW3	169 aa		4.6	□□□□□ -1.67
SGCE-210	ENST00000472326	ACTL6A	O96019	429 aa		4.6	□□□□□ -1.67
SGCE-210	ENST00000472326	PGK1	P00558	417 aa		4.6	□□□□□ -1.67
SGCE-210	ENST00000472326	H2AFZ	P0C0S5	128 aa		4.6	□□□□□ -1.67
SGCE-210	ENST00000472326	SLC6A8	P48029	635 aa		4.6	□□□□□ -1.67
SGCE-210	ENST00000472326	RPS6	P62753	249 aa	Known RBP	4.6	□□□□□ -1.67
SGCE-210	ENST00000472326	SRY	Q05066	204 aa		4.6	□□□□□ -1.67
SGCE-210	ENST00000472326	GOLGA7	Q7Z5G4	137 aa		4.6	□□□□□ -1.67
SGCE-210	ENST00000472326	TGIF2LY	Q8IUE0	185 aa		4.6	□□□□□ -1.67
SGCE-210	ENST00000472326	CADM2	Q8N3J6	435 aa		4.6	□□□□□ -1.67
SGCE-210	ENST00000472326	OR52E1	Q8NGJ3	308 aa		4.6	□□□□□ -1.67
SGCE-210	ENST00000472326	URGCP	Q8TCY9	931 aa		4.6	□□□□□ -1.67
SGCE-210	ENST00000472326	TRIM10	Q9UDY6	481 aa		4.6	□□□□□ -1.67
SGCE-210	ENST00000472326	IGKV6D-21	A0A0A0MT36	114 aa		4.59	□□□□□ -1.67
SGCE-210	ENST00000472326	ADAM12	O43184	909 aa		4.59	□□□□□ -1.67
SGCE-210	ENST00000472326	IGFBP1	P08833	259 aa	Predicted RBP	4.59	□□□□□ -1.67
SGCE-210	ENST00000472326	PSMB1	P20618	241 aa	Known RBP	4.59	□□□□□ -1.67
SGCE-210	ENST00000472326	ZP3	P21754	424 aa		4.59	□□□□□ -1.67
SGCE-210	ENST00000472326	CKAP4	Q07065	602 aa	Known RBP	4.59	□□□□□ -1.67
SGCE-210	ENST00000472326	PARP6	Q2NL67	630 aa		4.59	□□□□□ -1.67
SGCE-210	ENST00000472326	SBK1	Q52WX2	424 aa		4.59	□□□□□ -1.67
SGCE-210	ENST00000472326	ETFRF1	Q6IPR1	90 aa		4.59	□□□□□ -1.67
SGCE-210	ENST00000472326	MOB1B	Q7L9L4	216 aa		4.59	□□□□□ -1.67
SGCE-210	ENST00000472326	CCDC36	Q8IYA8	594 aa		4.59	□□□□□ -1.67
SGCE-210	ENST00000472326	DHTKD1	Q96HY7	919 aa	Predicted RBP	4.59	□□□□□ -1.67
SGCE-210	ENST00000472326	ACAT2	Q9BWD1	397 aa		4.59	□□□□□ -1.67
SGCE-210	ENST00000472326	DUS2	Q9NX74	493 aa	Known RBP	4.59	□□□□□ -1.67
SGCE-210	ENST00000472326	STRAP	Q9Y3F4	350 aa	Known RBP	4.59	□□□□□ -1.67
SGCE-210	ENST00000472326	WI2-2373I1.2	A0A1W2PRP0	233 aa		4.58	□□□□□ -1.68
SGCE-210	ENST00000472326	SYCE3	A1L190	88 aa		4.58	□□□□□ -1.68
SGCE-210	ENST00000472326	ZNF254	O75437	659 aa		4.58	□□□□□ -1.68
SGCE-210	ENST00000472326	IGHV3-23	P01764	117 aa		4.58	□□□□□ -1.68
SGCE-210	ENST00000472326	RIPK4	P57078	832 aa		4.58	□□□□□ -1.68
SGCE-210	ENST00000472326	LRIT3	Q3SXY7	679 aa		4.58	□□□□□ -1.68
SGCE-210	ENST00000472326	C1orf186	Q6ZWK4	172 aa		4.58	□□□□□ -1.68
SGCE-210	ENST00000472326	P4HA3	Q7Z4N8	544 aa		4.58	□□□□□ -1.68
SGCE-210	ENST00000472326	ARFGAP2	Q8N6H7	521 aa		4.58	□□□□□ -1.68
SGCE-210	ENST00000472326	CSNK1A1L	Q8N752	337 aa		4.58	□□□□□ -1.68
SGCE-210	ENST00000472326	FTHL17	Q9BXU8	183 aa		4.58	□□□□□ -1.68
SGCE-210	ENST00000472326	ABCG8	Q9H221	673 aa		4.58	□□□□□ -1.68
SGCE-210	ENST00000472326	RPS6KB2	Q9UBS0	482 aa		4.58	□□□□□ -1.68
SGCE-210	ENST00000472326	FETUB	Q9UGM5	382 aa		4.58	□□□□□ -1.68
SGCE-210	ENST00000472326	DDX39A	O00148	427 aa	Known RBP	4.57	□□□□□ -1.68
SGCE-210	ENST00000472326	PRDX6	P30041	224 aa		4.57	□□□□□ -1.68
SGCE-210	ENST00000472326	UGT1A3	P35503	534 aa		4.57	□□□□□ -1.68
SGCE-210	ENST00000472326	RIPPLY3	P57055	190 aa		4.57	□□□□□ -1.68
SGCE-210	ENST00000472326	MYBPC1	Q00872	1141 aa		4.57	□□□□□ -1.68

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