RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 HPF1Q9NWY4 346 aa15.58■□□□□ 0.08
CCM2-205ENST00000472223 FXYD1O00168 92 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 HMGN4O00479 90 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 TP53I11O14683 189 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 STX11O75558 287 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 DNAJB5O75953 348 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 ABCD3P28288 659 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 PIGAP37287 484 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 CYB561P49447 251 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 CLK3P49761 638 aaKnown RBP15.57■□□□□ 0.08
CCM2-205ENST00000472223 SLC7A2P52569 658 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 CRISP3P54108 245 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 RBBP4Q09028 425 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 EFR3AQ14156 821 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 TBR1Q16650 682 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 ZNF630Q2M218 657 aaPredicted RBP15.57■□□□□ 0.08
CCM2-205ENST00000472223 ARHGAP11BQ3KRB8 267 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 RABL3Q5HYI8 236 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 SAMD4BQ5PRF9 694 aaKnown RBP15.57■□□□□ 0.08
CCM2-205ENST00000472223 DCST2Q5T1A1 773 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 B3GNTL1Q67FW5 361 aaPredicted RBP15.57■□□□□ 0.08
CCM2-205ENST00000472223 RINLQ6ZS11 566 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 ARMC10Q8N2F6 343 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 ZNF441Q8N8Z8 693 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 C11orf65Q8NCR3 313 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 FDCSPQ8NFU4 85 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 PSMF1Q92530 271 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 HOXB13Q92826 284 aaPredicted RBP15.57■□□□□ 0.08
CCM2-205ENST00000472223 TMBIM1Q969X1 311 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 TMEM125Q96AQ2 219 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 MCUR1Q96AQ8 359 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 TMCO6Q96DC7 493 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 OMA1Q96E52 524 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 CDRT15Q96T59 188 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 KAT8Q9H7Z6 458 aaKnown RBP15.57■□□□□ 0.08
CCM2-205ENST00000472223 TRIM45Q9H8W5 580 aaPredicted RBP15.57■□□□□ 0.08
CCM2-205ENST00000472223 FRYQ5TBA9 3013 aa15.57■□□□□ 0.08
CCM2-205ENST00000472223 DOCK10Q96BY6 2186 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 IGF2RP11717 2491 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 GSTA4O15217 222 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 STAMBPO95630 424 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 HPGDP15428 266 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 LCN1P31025 176 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 MAP3K8P41279 467 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 MAN2A2P49641 1150 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 PNLIPRP2P54317 469 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 EEFSECP57772 596 aaKnown RBP15.56■□□□□ 0.08
CCM2-205ENST00000472223 ARG2P78540 354 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 MFAP5Q13361 173 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 SPATS1Q496A3 300 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 INTS11Q5TA45 600 aaKnown RBP15.56■□□□□ 0.08
CCM2-205ENST00000472223 FIGNL1Q6PIW4 674 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 IL20RBQ6UXL0 311 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 NPSR1Q6W5P4 371 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 NUP54Q7Z3B4 507 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 IFNEQ86WN2 208 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 SLC15A3Q8IY34 581 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 PRR22Q8IZ63 422 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 BEST3Q8N1M1 668 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 BCORP1Q8N888 145 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 OR2T12Q8NG77 320 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 COL21A1Q96P44 957 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 TRNT1Q96Q11 434 aaKnown RBP15.56■□□□□ 0.08
CCM2-205ENST00000472223 HOXD1Q9GZZ0 328 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 ALG2Q9H553 416 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 PIF1Q9H611 641 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 ZBTB20Q9HC78 741 aaPredicted RBP15.56■□□□□ 0.08
CCM2-205ENST00000472223 A4GALTQ9NPC4 353 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 POLE3Q9NRF9 147 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 TAS2R1Q9NYW7 299 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 PRPF19Q9UMS4 504 aaKnown RBP15.56■□□□□ 0.08
CCM2-205ENST00000472223 ANGPT4Q9Y264 503 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 ZNF451Q9Y4E5 1061 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 PCDHGB7Q9Y5F8 929 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 PCDHGA9Q9Y5G4 932 aaKnown RBP15.56■□□□□ 0.08
CCM2-205ENST00000472223 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.56■□□□□ 0.08
CCM2-205ENST00000472223 PCSK5Q92824 1860 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 ASPMQ8IZT6 3477 aa15.56■□□□□ 0.08
CCM2-205ENST00000472223 ANKRD11Q6UB99 2663 aaPredicted RBP15.55■□□□□ 0.08
CCM2-205ENST00000472223 CHD8Q9HCK8 2581 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 GXYLT2A0PJZ3 443 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 TMEM200CA6NKL6 621 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 PPM1BO75688 479 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 CEACAM4O75871 244 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 KCNK2O95069 426 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 IL33O95760 270 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 BMP2P12643 396 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 SOX11P35716 441 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 HLCSP50747 726 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 MVDP53602 400 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 CDK6Q00534 326 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 LIPEQ05469 1076 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 SELPLGQ14242 412 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 C8orf82Q6P1X6 216 aaPredicted RBP15.55■□□□□ 0.08
CCM2-205ENST00000472223 C16orf47Q6ZP98 133 aaPredicted RBP15.55■□□□□ 0.08
CCM2-205ENST00000472223 KRT73Q86Y46 540 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 ZADH2Q8N4Q0 377 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 AMER2Q8N7J2 671 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 ZNF527Q8NB42 609 aa15.55■□□□□ 0.08
CCM2-205ENST00000472223 FAM13CQ8NE31 585 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms