RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 COQ9O75208 318 aa20.47■□□□□ 0.87
C9orf3-213ENST00000471978 IL18BPO95998 194 aa20.47■□□□□ 0.87
C9orf3-213ENST00000471978 PROCP04070 461 aa20.47■□□□□ 0.87
C9orf3-213ENST00000471978 JUNP05412 331 aaKnown RBP20.47■□□□□ 0.87
C9orf3-213ENST00000471978 TMIGD3P0DMS9 266 aaPredicted RBP20.47■□□□□ 0.87
C9orf3-213ENST00000471978 TACR1P25103 407 aa20.47■□□□□ 0.87
C9orf3-213ENST00000471978 NCBP2P52298 156 aaKnown RBP eCLIP20.47■□□□□ 0.876e-7■■■■■ 27.1
C9orf3-213ENST00000471978 GFRA1P56159 465 aa20.47■□□□□ 0.87
C9orf3-213ENST00000471978 NAA20P61599 178 aa20.47■□□□□ 0.87
C9orf3-213ENST00000471978 MRPS22P82650 360 aaKnown RBP20.47■□□□□ 0.87
C9orf3-213ENST00000471978 ZNF155Q12901 538 aaPredicted RBP20.47■□□□□ 0.87
C9orf3-213ENST00000471978 CFAP157Q5JU67 520 aa20.47■□□□□ 0.87
C9orf3-213ENST00000471978 FAM71E1Q6IPT2 247 aa20.47■□□□□ 0.87
C9orf3-213ENST00000471978 AAGABQ6PD74 315 aa20.47■□□□□ 0.87
C9orf3-213ENST00000471978 FRMD7Q6ZUT3 714 aa20.47■□□□□ 0.87
C9orf3-213ENST00000471978 SH2D5Q6ZV89 423 aa20.47■□□□□ 0.87
C9orf3-213ENST00000471978 MIEF1Q9NQG6 463 aa20.47■□□□□ 0.87
C9orf3-213ENST00000471978 DKKL1Q9UK85 242 aa20.47■□□□□ 0.87
C9orf3-213ENST00000471978 GRID1Q9ULK0 1009 aa20.47■□□□□ 0.87
C9orf3-213ENST00000471978 CBLCQ9ULV8 474 aa20.47■□□□□ 0.87
C9orf3-213ENST00000471978 POLR3HQ9Y535 204 aaPredicted RBP20.47■□□□□ 0.87
C9orf3-213ENST00000471978 TUBAL3A6NHL2 446 aa20.46■□□□□ 0.87
C9orf3-213ENST00000471978 H3BQF6 201 aa20.46■□□□□ 0.87
C9orf3-213ENST00000471978 SHBGP04278 402 aa20.46■□□□□ 0.87
C9orf3-213ENST00000471978 GRK2P25098 689 aa20.46■□□□□ 0.87
C9orf3-213ENST00000471978 MC3RP41968 323 aa20.46■□□□□ 0.87
C9orf3-213ENST00000471978 CCT5P48643 541 aa20.46■□□□□ 0.87
C9orf3-213ENST00000471978 STARP49675 285 aa20.46■□□□□ 0.87
C9orf3-213ENST00000471978 GAS1P54826 345 aa20.46■□□□□ 0.87
C9orf3-213ENST00000471978 CCDC153Q494R4 210 aa20.46■□□□□ 0.87
C9orf3-213ENST00000471978 SH2D4BQ5SQS7 431 aa20.46■□□□□ 0.87
C9orf3-213ENST00000471978 TMEM107Q6UX40 140 aa20.46■□□□□ 0.87
C9orf3-213ENST00000471978 TRIM46Q7Z4K8 759 aa20.46■□□□□ 0.87
C9orf3-213ENST00000471978 KIF18BQ86Y91 864 aa20.46■□□□□ 0.87
C9orf3-213ENST00000471978 FAM76AQ8TAV0 307 aa20.46■□□□□ 0.87
C9orf3-213ENST00000471978 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.46■□□□□ 0.87
C9orf3-213ENST00000471978 RNF138Q8WVD3 245 aa20.46■□□□□ 0.87
C9orf3-213ENST00000471978 NINJ1Q92982 152 aa20.46■□□□□ 0.87
C9orf3-213ENST00000471978 SFXN2Q96NB2 322 aa20.46■□□□□ 0.87
C9orf3-213ENST00000471978 TM9SF2Q99805 663 aa20.46■□□□□ 0.87
C9orf3-213ENST00000471978 LIME1Q9H400 295 aa20.46■□□□□ 0.87
C9orf3-213ENST00000471978 MYNNQ9NPC7 610 aa20.46■□□□□ 0.87
C9orf3-213ENST00000471978 TAS2R7Q9NYW3 318 aa20.46■□□□□ 0.87
C9orf3-213ENST00000471978 JKAMPQ9P055 326 aa20.46■□□□□ 0.87
C9orf3-213ENST00000471978 MRPS18CQ9Y3D5 142 aaKnown RBP20.46■□□□□ 0.87
C9orf3-213ENST00000471978 DOCK7Q96N67 2140 aa20.45■□□□□ 0.86
C9orf3-213ENST00000471978 A0A087WV62 115 aa20.45■□□□□ 0.86
C9orf3-213ENST00000471978 CLCA1A8K7I4 914 aa20.45■□□□□ 0.86
C9orf3-213ENST00000471978 PLIN3O60664 434 aa20.45■□□□□ 0.86
C9orf3-213ENST00000471978 SLITRK5O94991 958 aa20.45■□□□□ 0.86
C9orf3-213ENST00000471978 TCEA1P23193 301 aaKnown RBP20.45■□□□□ 0.86
C9orf3-213ENST00000471978 LHX2P50458 406 aa20.45■□□□□ 0.86
C9orf3-213ENST00000471978 DNAJB13P59910 316 aa20.45■□□□□ 0.86
C9orf3-213ENST00000471978 PSG6Q00889 435 aa20.45■□□□□ 0.86
C9orf3-213ENST00000471978 FOXF2Q12947 444 aa20.45■□□□□ 0.86
C9orf3-213ENST00000471978 ADGRE4PQ86SQ3 457 aa20.45■□□□□ 0.86
C9orf3-213ENST00000471978 GOT1L1Q8NHS2 421 aaPredicted RBP20.45■□□□□ 0.86
C9orf3-213ENST00000471978 UBLCP1Q8WVY7 318 aaPredicted RBP20.45■□□□□ 0.86
C9orf3-213ENST00000471978 RMND5BQ96G75 393 aaPredicted RBP20.45■□□□□ 0.86
C9orf3-213ENST00000471978 ZFP3Q96NJ6 502 aa20.45■□□□□ 0.86
C9orf3-213ENST00000471978 UCN2Q96RP3 112 aa20.45■□□□□ 0.86
C9orf3-213ENST00000471978 RRAGDQ9NQL2 400 aaPredicted RBP20.45■□□□□ 0.86
C9orf3-213ENST00000471978 ST6GALNAC2Q9UJ37 374 aa20.45■□□□□ 0.86
C9orf3-213ENST00000471978 C19orf53Q9UNZ5 99 aaPredicted RBP20.45■□□□□ 0.86
C9orf3-213ENST00000471978 WBP11Q9Y2W2 641 aaKnown RBP20.45■□□□□ 0.86
C9orf3-213ENST00000471978 ZFHX3Q15911 3703 aa20.44■□□□□ 0.86
C9orf3-213ENST00000471978 RSL1D1O76021 490 aaKnown RBP20.44■□□□□ 0.86
C9orf3-213ENST00000471978 RCBTB2O95199 551 aa20.44■□□□□ 0.86
C9orf3-213ENST00000471978 DPP4P27487 766 aa20.44■□□□□ 0.86
C9orf3-213ENST00000471978 NTSP30990 170 aa20.44■□□□□ 0.86
C9orf3-213ENST00000471978 CRHR1P34998 444 aa20.44■□□□□ 0.86
C9orf3-213ENST00000471978 DAZAP2Q15038 168 aaPredicted RBP20.44■□□□□ 0.86
C9orf3-213ENST00000471978 CYP27C1Q4G0S4 372 aa20.44■□□□□ 0.86
C9orf3-213ENST00000471978 NOXRED1Q6NXP6 359 aa20.44■□□□□ 0.86
C9orf3-213ENST00000471978 PLXDC2Q6UX71 529 aa20.44■□□□□ 0.86
C9orf3-213ENST00000471978 CDC20BQ86Y33 519 aa20.44■□□□□ 0.86
C9orf3-213ENST00000471978 CCDC63Q8NA47 563 aa20.44■□□□□ 0.86
C9orf3-213ENST00000471978 LRRN4CLQ8ND94 238 aa20.44■□□□□ 0.86
C9orf3-213ENST00000471978 OR4K17Q8NGC6 315 aa20.44■□□□□ 0.86
C9orf3-213ENST00000471978 WNT2BQ93097 391 aa20.44■□□□□ 0.86
C9orf3-213ENST00000471978 INTS12Q96CB8 462 aaKnown RBP20.44■□□□□ 0.86
C9orf3-213ENST00000471978 G6PC3Q9BUM1 346 aa20.44■□□□□ 0.86
C9orf3-213ENST00000471978 SFXN3Q9BWM7 321 aa20.44■□□□□ 0.86
C9orf3-213ENST00000471978 C12orf65Q9H3J6 166 aaKnown RBP20.44■□□□□ 0.86
C9orf3-213ENST00000471978 GLIPR2Q9H4G4 154 aa20.44■□□□□ 0.86
C9orf3-213ENST00000471978 TNFRSF12AQ9NP84 129 aa20.44■□□□□ 0.86
C9orf3-213ENST00000471978 CCM2LQ9NUG4 571 aaPredicted RBP20.44■□□□□ 0.86
C9orf3-213ENST00000471978 OXSMQ9NWU1 459 aa20.44■□□□□ 0.86
C9orf3-213ENST00000471978 PPP4R1LQ9P1A2 415 aa20.44■□□□□ 0.86
C9orf3-213ENST00000471978 RPH3AQ9Y2J0 694 aaPredicted RBP20.44■□□□□ 0.86
C9orf3-213ENST00000471978 SMIM23A6NLE4 172 aa20.43■□□□□ 0.86
C9orf3-213ENST00000471978 C17orf51A8MQB3 221 aa20.43■□□□□ 0.86
C9orf3-213ENST00000471978 B4DXG7 233 aa20.43■□□□□ 0.86
C9orf3-213ENST00000471978 UPK1AO00322 258 aa20.43■□□□□ 0.86
C9orf3-213ENST00000471978 PLOD2O00469 737 aa20.43■□□□□ 0.86
C9orf3-213ENST00000471978 SCO2O43819 266 aa20.43■□□□□ 0.86
C9orf3-213ENST00000471978 ZIC3O60481 467 aa20.43■□□□□ 0.86
C9orf3-213ENST00000471978 UROSP10746 265 aa20.43■□□□□ 0.86
C9orf3-213ENST00000471978 EPXP11678 715 aa20.43■□□□□ 0.86
C9orf3-213ENST00000471978 CPA3P15088 417 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms