RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 MKLN1Q9UL63 735 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 UBE2J1Q9Y385 318 aaPredicted RBP8.12□□□□□ -1.11
CD47-204ENST00000471694 ZNF587BE7ETH6 402 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 FAM72CH0Y354 149 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 LILRB5O75023 590 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 HOXA11P31270 313 aaPredicted RBP8.12□□□□□ -1.11
CD47-204ENST00000471694 UFM1P61960 85 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 FXNQ16595 210 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 UGT3A2Q3SY77 523 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 FAM72AQ5TYM5 149 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 UBE2UQ5VVX9 321 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 FAM72DQ6L9T8 149 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 METTL2BQ6P1Q9 378 aaKnown RBP8.12□□□□□ -1.11
CD47-204ENST00000471694 ADGRD1Q6QNK2 874 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 SLCO6A1Q86UG4 719 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 FAM72BQ86X60 149 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 OR4N2Q8NGD1 307 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 TBC1D15Q8TC07 691 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 CLK4Q9HAZ1 481 aaKnown RBP8.12□□□□□ -1.11
CD47-204ENST00000471694 LRFN1Q9P244 771 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 ADAMTS5Q9UNA0 930 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 HS3ST3A1Q9Y663 406 aa8.12□□□□□ -1.11
CD47-204ENST00000471694 UGT2B7P16662 529 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 SLC2A5P22732 501 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 RPE65Q16518 533 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 TBC1D28Q2M2D7 210 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 AAED1Q7RTV5 226 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 GID4Q8IVV7 300 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 PGAM4Q8N0Y7 254 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 ARFGAP1Q8N6T3 406 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 OR52E2Q8NGJ4 325 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 PIGCQ92535 297 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 ANKRD27Q96NW4 1050 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 MACROD1Q9BQ69 325 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 ZIM2Q9NZV7 527 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 GJD2Q9UKL4 321 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 CCL26Q9Y258 94 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 SNED1Q8TER0 1413 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 NPIPB15A6NHN6 443 aaPredicted RBP8.11□□□□□ -1.11
CD47-204ENST00000471694 SYT7O43581 403 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 TTKP33981 857 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 OR1E2P47887 323 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 TAS2R43P59537 309 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 C2CD4AQ8NCU7 369 aaPredicted RBP8.11□□□□□ -1.11
CD47-204ENST00000471694 IMP4Q96G21 291 aaKnown RBP8.11□□□□□ -1.11
CD47-204ENST00000471694 LRCH3Q96II8 777 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 KCNA7Q96RP8 456 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 MND1Q9BWT6 205 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 SAP130Q9H0E3 1048 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 FKRPQ9H9S5 495 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 OBP2AQ9NY56 170 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 MED16Q9Y2X0 877 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 PCDHGA10Q9Y5H3 936 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 ANKRD61A6NGH8 418 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 ARL6IP5O75915 188 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 NADKO95544 446 aaPredicted RBP8.11□□□□□ -1.11
CD47-204ENST00000471694 PSMD7P51665 324 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 PLA2G7Q13093 441 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 PDK3Q15120 406 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 GPR19Q15760 415 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 TMEM176BQ3YBM2 270 aaPredicted RBP8.11□□□□□ -1.11
CD47-204ENST00000471694 CYBRD1Q53TN4 286 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 TRIM46Q7Z4K8 759 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 TMEM203Q969S6 136 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 RRNAD1Q96FB5 475 aaKnown RBP8.11□□□□□ -1.11
CD47-204ENST00000471694 LRRC3Q9BY71 257 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 FAIMQ9NVQ4 179 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.11□□□□□ -1.11
CD47-204ENST00000471694 SH2B3Q9UQQ2 575 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 KLF13Q9Y2Y9 288 aaPredicted RBP8.11□□□□□ -1.11
CD47-204ENST00000471694 TMEM14AQ9Y6G1 99 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 RGPD8O14715 1765 aaPredicted RBP8.11□□□□□ -1.11
CD47-204ENST00000471694 COL16A1Q07092 1604 aaPredicted RBP8.11□□□□□ -1.11
CD47-204ENST00000471694 TPPPO94811 219 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 RBM34P42696 430 aaKnown RBP8.11□□□□□ -1.11
CD47-204ENST00000471694 HK3P52790 923 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 RPS26P62854 115 aaKnown RBP8.11□□□□□ -1.11
CD47-204ENST00000471694 ASCC1Q8N9N2 400 aaKnown RBP8.11□□□□□ -1.11
CD47-204ENST00000471694 OR51T1Q8NGJ9 327 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 HSH2DQ96JZ2 352 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 ZNF350Q9GZX5 532 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 DMAC2Q9NW81 257 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 FUOMA2VDF0 154 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 LRRN3E7EW58 273 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 PHYHO14832 338 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 RAD1O60671 282 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 OXSR1O95747 527 aaPredicted RBP8.11□□□□□ -1.11
CD47-204ENST00000471694 COX6B1P14854 86 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 ZNF44P15621 663 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 EPHA1P21709 976 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 RBMXP38159 391 aaKnown RBP8.11□□□□□ -1.11
CD47-204ENST00000471694 HTR5AP47898 357 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 PCBP4P57723 403 aaKnown RBP8.11□□□□□ -1.11
CD47-204ENST00000471694 TNFAIP8L3Q5GJ75 292 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 TMEM71Q6P5X7 295 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 S100A7AQ86SG5 101 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 LRRTM3Q86VH5 581 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 SLITRK4Q8IW52 837 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 MS4A4EQ96PG1 132 aa8.11□□□□□ -1.11
CD47-204ENST00000471694 TAAR9Q96RI9 348 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms