RNA–Protein interactions for RNA: ENST00000469003.5

CCDC28B-204, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 2

Gene CCDC28B, Length 1,235 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-204ENST00000469003 H0Y3Z8 333 aa15.05■□□□□ -0
CCDC28B-204ENST00000469003 COQ9O75208 318 aa15.05■□□□□ -0
CCDC28B-204ENST00000469003 SLITRK5O94991 958 aa15.05■□□□□ -0
CCDC28B-204ENST00000469003 PROCP04070 461 aa15.05■□□□□ -0
CCDC28B-204ENST00000469003 TMIGD3P0DMS9 266 aaPredicted RBP15.05■□□□□ -0
CCDC28B-204ENST00000469003 TACR1P25103 407 aa15.05■□□□□ -0
CCDC28B-204ENST00000469003 AGFG1P52594 562 aaKnown RBP15.05■□□□□ -0
CCDC28B-204ENST00000469003 MRPS22P82650 360 aaKnown RBP15.05■□□□□ -0
CCDC28B-204ENST00000469003 C2orf80Q0P641 193 aa15.05■□□□□ -0
CCDC28B-204ENST00000469003 DAZAP2Q15038 168 aaPredicted RBP15.05■□□□□ -0
CCDC28B-204ENST00000469003 IMPG1Q17R60 797 aa15.05■□□□□ -0
CCDC28B-204ENST00000469003 FAM71E1Q6IPT2 247 aa15.05■□□□□ -0
CCDC28B-204ENST00000469003 AAGABQ6PD74 315 aa15.05■□□□□ -0
CCDC28B-204ENST00000469003 FRMD7Q6ZUT3 714 aa15.05■□□□□ -0
CCDC28B-204ENST00000469003 SH2D5Q6ZV89 423 aa15.05■□□□□ -0
CCDC28B-204ENST00000469003 SLC44A2Q8IWA5 706 aaPredicted RBP15.05■□□□□ -0
CCDC28B-204ENST00000469003 CDC26Q8NHZ8 85 aa15.05■□□□□ -0
CCDC28B-204ENST00000469003 FAM76AQ8TAV0 307 aa15.05■□□□□ -0
CCDC28B-204ENST00000469003 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.05■□□□□ -0
CCDC28B-204ENST00000469003 ZFP3Q96NJ6 502 aa15.05■□□□□ -0
CCDC28B-204ENST00000469003 UCN2Q96RP3 112 aa15.05■□□□□ -0
CCDC28B-204ENST00000469003 TM9SF2Q99805 663 aa15.05■□□□□ -0
CCDC28B-204ENST00000469003 TAS2R7Q9NYW3 318 aa15.05■□□□□ -0
CCDC28B-204ENST00000469003 GRID1Q9ULK0 1009 aa15.05■□□□□ -0
CCDC28B-204ENST00000469003 CBLCQ9ULV8 474 aa15.05■□□□□ -0
CCDC28B-204ENST00000469003 WBP11Q9Y2W2 641 aaKnown RBP15.05■□□□□ -0
CCDC28B-204ENST00000469003 EEF1E1-BLOC1S5C9J1V9 151 aa15.04■□□□□ -0
CCDC28B-204ENST00000469003 EEF1E1O43324 174 aaKnown RBP15.04■□□□□ -0
CCDC28B-204ENST00000469003 RCBTB2O95199 551 aa15.04■□□□□ -0
CCDC28B-204ENST00000469003 GRK2P25098 689 aa15.04■□□□□ -0
CCDC28B-204ENST00000469003 LHX2P50458 406 aa15.04■□□□□ -0
CCDC28B-204ENST00000469003 NCBP2P52298 156 aaKnown RBP eCLIP15.04■□□□□ -0
CCDC28B-204ENST00000469003 DGKQP52824 942 aa15.04■□□□□ -0
CCDC28B-204ENST00000469003 GAS1P54826 345 aa15.04■□□□□ -0
CCDC28B-204ENST00000469003 DNAJB13P59910 316 aa15.04■□□□□ -0
CCDC28B-204ENST00000469003 SORDQ00796 357 aa15.04■□□□□ -0
CCDC28B-204ENST00000469003 PSG6Q00889 435 aa15.04■□□□□ -0
CCDC28B-204ENST00000469003 SRYQ05066 204 aa15.04■□□□□ -0
CCDC28B-204ENST00000469003 ZNF155Q12901 538 aaPredicted RBP15.04■□□□□ -0
CCDC28B-204ENST00000469003 PRSS53Q2L4Q9 553 aa15.04■□□□□ -0
CCDC28B-204ENST00000469003 CCDC153Q494R4 210 aa15.04■□□□□ -0
CCDC28B-204ENST00000469003 TRIM46Q7Z4K8 759 aa15.04■□□□□ -0
CCDC28B-204ENST00000469003 OR4N2Q8NGD1 307 aa15.04■□□□□ -0
CCDC28B-204ENST00000469003 WNT2BQ93097 391 aa15.04■□□□□ -0
CCDC28B-204ENST00000469003 EFHD2Q96C19 240 aaPredicted RBP15.04■□□□□ -0
CCDC28B-204ENST00000469003 SFXN2Q96NB2 322 aa15.04■□□□□ -0
CCDC28B-204ENST00000469003 FOXC2Q99958 501 aa15.04■□□□□ -0
CCDC28B-204ENST00000469003 SFXN3Q9BWM7 321 aa15.04■□□□□ -0
CCDC28B-204ENST00000469003 MYNNQ9NPC7 610 aa15.04■□□□□ -0
CCDC28B-204ENST00000469003 MIEF1Q9NQG6 463 aa15.04■□□□□ -0
CCDC28B-204ENST00000469003 ST6GALNAC2Q9UJ37 374 aa15.04■□□□□ -0
CCDC28B-204ENST00000469003 DKKL1Q9UK85 242 aa15.04■□□□□ -0
CCDC28B-204ENST00000469003 OR10H1Q9Y4A9 318 aa15.04■□□□□ -0
CCDC28B-204ENST00000469003 TUBAL3A6NHL2 446 aa15.03■□□□□ -0
CCDC28B-204ENST00000469003 CLCA1A8K7I4 914 aa15.03■□□□□ -0
CCDC28B-204ENST00000469003 PLOD2O00469 737 aa15.03■□□□□ -0
CCDC28B-204ENST00000469003 PLIN3O60664 434 aa15.03■□□□□ -0
CCDC28B-204ENST00000469003 CRCPO75575 148 aa15.03■□□□□ -0
CCDC28B-204ENST00000469003 RSL1D1O76021 490 aaKnown RBP15.03■□□□□ -0
CCDC28B-204ENST00000469003 JUNP05412 331 aaKnown RBP15.03■□□□□ -0
CCDC28B-204ENST00000469003 EPXP11678 715 aa15.03■□□□□ -0
CCDC28B-204ENST00000469003 CHMP24386 653 aa15.03■□□□□ -0
CCDC28B-204ENST00000469003 NTSP30990 170 aa15.03■□□□□ -0
CCDC28B-204ENST00000469003 MC3RP41968 323 aa15.03■□□□□ -0
CCDC28B-204ENST00000469003 CCT5P48643 541 aa15.03■□□□□ -0
CCDC28B-204ENST00000469003 STARP49675 285 aa15.03■□□□□ -0
CCDC28B-204ENST00000469003 CYP27C1Q4G0S4 372 aa15.03■□□□□ -0
CCDC28B-204ENST00000469003 OR5M10Q6IEU7 315 aa15.03■□□□□ -0
CCDC28B-204ENST00000469003 CDC20BQ86Y33 519 aa15.03■□□□□ -0
CCDC28B-204ENST00000469003 GSPT2Q8IYD1 628 aaKnown RBP15.03■□□□□ -0
CCDC28B-204ENST00000469003 GOT1L1Q8NHS2 421 aaPredicted RBP15.03■□□□□ -0
CCDC28B-204ENST00000469003 RMND5BQ96G75 393 aaPredicted RBP15.03■□□□□ -0
CCDC28B-204ENST00000469003 G6PC3Q9BUM1 346 aa15.03■□□□□ -0
CCDC28B-204ENST00000469003 CXXC4Q9H2H0 198 aa15.03■□□□□ -0
CCDC28B-204ENST00000469003 LIME1Q9H400 295 aa15.03■□□□□ -0
CCDC28B-204ENST00000469003 RRAGDQ9NQL2 400 aaPredicted RBP15.03■□□□□ -0
CCDC28B-204ENST00000469003 CCM2LQ9NUG4 571 aaPredicted RBP15.03■□□□□ -0
CCDC28B-204ENST00000469003 CLCF1Q9UBD9 225 aa15.03■□□□□ -0
CCDC28B-204ENST00000469003 EDARQ9UNE0 448 aa15.03■□□□□ -0
CCDC28B-204ENST00000469003 C19orf53Q9UNZ5 99 aaPredicted RBP15.03■□□□□ -0
CCDC28B-204ENST00000469003 POLR3HQ9Y535 204 aaPredicted RBP15.03■□□□□ -0
CCDC28B-204ENST00000469003 B4DXG7 233 aa15.02■□□□□ -0
CCDC28B-204ENST00000469003 ZIC3O60481 467 aa15.02■□□□□ -0
CCDC28B-204ENST00000469003 PSMG1O95456 288 aa15.02■□□□□ -0
CCDC28B-204ENST00000469003 ZNF708P17019 499 aa15.02■□□□□ -0
CCDC28B-204ENST00000469003 DPP4P27487 766 aa15.02■□□□□ -0
CCDC28B-204ENST00000469003 EVI2BP34910 448 aa15.02■□□□□ -0
CCDC28B-204ENST00000469003 CRHR1P34998 444 aa15.02■□□□□ -0
CCDC28B-204ENST00000469003 DSCR4P56555 118 aaPredicted RBP15.02■□□□□ -0
CCDC28B-204ENST00000469003 CLDN18P56856 261 aa15.02■□□□□ -0
CCDC28B-204ENST00000469003 FOXF2Q12947 444 aa15.02■□□□□ -0
CCDC28B-204ENST00000469003 CFAP157Q5JU67 520 aa15.02■□□□□ -0
CCDC28B-204ENST00000469003 TMEM107Q6UX40 140 aa15.02■□□□□ -0
CCDC28B-204ENST00000469003 IKBIPQ70UQ0 350 aa15.02■□□□□ -0
CCDC28B-204ENST00000469003 TDRPQ86YL5 185 aa15.02■□□□□ -0
CCDC28B-204ENST00000469003 OR2L13Q8N349 312 aa15.02■□□□□ -0
CCDC28B-204ENST00000469003 EIF1ADQ8N9N8 165 aaKnown RBP15.02■□□□□ -0
CCDC28B-204ENST00000469003 OR4K17Q8NGC6 315 aa15.02■□□□□ -0
CCDC28B-204ENST00000469003 METTL2AQ96IZ6 378 aaKnown RBP15.02■□□□□ -0
CCDC28B-204ENST00000469003 ACBD3Q9H3P7 528 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms