RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 ATP6V0BQ99437 205 aa3.68□□□□□ -1.82
XRN1-207ENST00000468894 NDUFAF3Q9BU61 184 aa3.68□□□□□ -1.82
XRN1-207ENST00000468894 DCAF13Q9NV06 445 aaKnown RBP3.68□□□□□ -1.82
XRN1-207ENST00000468894 NAP1L2Q9ULW6 460 aaPredicted RBP3.68□□□□□ -1.82
XRN1-207ENST00000468894 FKBP7Q9Y680 259 aa3.68□□□□□ -1.82
XRN1-207ENST00000468894 CCER2I3L3R5 266 aa3.67□□□□□ -1.82
XRN1-207ENST00000468894 DDX39AO00148 427 aaKnown RBP3.67□□□□□ -1.82
XRN1-207ENST00000468894 KERAO60938 352 aa3.67□□□□□ -1.82
XRN1-207ENST00000468894 ZCCHC18P0CG32 403 aa3.67□□□□□ -1.82
XRN1-207ENST00000468894 SDC1P18827 310 aa3.67□□□□□ -1.82
XRN1-207ENST00000468894 ZP3P21754 424 aa3.67□□□□□ -1.82
XRN1-207ENST00000468894 P2RY4P51582 365 aa3.67□□□□□ -1.82
XRN1-207ENST00000468894 PAGE2BQ5JRK9 111 aa3.67□□□□□ -1.82
XRN1-207ENST00000468894 ZNF658Q5TYW1 1059 aaPredicted RBP3.67□□□□□ -1.82
XRN1-207ENST00000468894 UFSP1Q6NVU6 142 aa3.67□□□□□ -1.82
XRN1-207ENST00000468894 Q6ZVH6 145 aa3.67□□□□□ -1.82
XRN1-207ENST00000468894 GOLGA7Q7Z5G4 137 aa3.67□□□□□ -1.82
XRN1-207ENST00000468894 PARGQ86W56 976 aa3.67□□□□□ -1.82
XRN1-207ENST00000468894 C9orf40Q8IXQ3 194 aa3.67□□□□□ -1.82
XRN1-207ENST00000468894 CCDC36Q8IYA8 594 aa3.67□□□□□ -1.82
XRN1-207ENST00000468894 MCOLN2Q8IZK6 566 aa3.67□□□□□ -1.82
XRN1-207ENST00000468894 CENPSQ8N2Z9 138 aa3.67□□□□□ -1.82
XRN1-207ENST00000468894 FRAT1Q92837 279 aaPredicted RBP3.67□□□□□ -1.82
XRN1-207ENST00000468894 MAGEB18Q96M61 343 aa3.67□□□□□ -1.82
XRN1-207ENST00000468894 CARD6Q9BX69 1037 aa3.67□□□□□ -1.82
XRN1-207ENST00000468894 FTHL17Q9BXU8 183 aa3.67□□□□□ -1.82
XRN1-207ENST00000468894 ZNF702PQ9H963 129 aa3.67□□□□□ -1.82
XRN1-207ENST00000468894 HOMER3Q9NSC5 361 aa3.67□□□□□ -1.82
XRN1-207ENST00000468894 FLVCR1Q9Y5Y0 555 aa3.67□□□□□ -1.82
XRN1-207ENST00000468894 IMPA2O14732 288 aa3.66□□□□□ -1.82
XRN1-207ENST00000468894 ADAM12O43184 909 aa3.66□□□□□ -1.82
XRN1-207ENST00000468894 SERF1AO75920 110 aa3.66□□□□□ -1.82
XRN1-207ENST00000468894 NOL4O94818 638 aa3.66□□□□□ -1.82
XRN1-207ENST00000468894 HSPB1P04792 205 aaKnown RBP3.66□□□□□ -1.82
XRN1-207ENST00000468894 H2AFZP0C0S5 128 aa3.66□□□□□ -1.82
XRN1-207ENST00000468894 NT5C2P49902 561 aa3.66□□□□□ -1.82
XRN1-207ENST00000468894 RPS6P62753 249 aaKnown RBP3.66□□□□□ -1.82
XRN1-207ENST00000468894 ZP4Q12836 540 aa3.66□□□□□ -1.82
XRN1-207ENST00000468894 RAB35Q15286 201 aa3.66□□□□□ -1.82
XRN1-207ENST00000468894 CARTPTQ16568 116 aa3.66□□□□□ -1.82
XRN1-207ENST00000468894 KRTAP13-3Q3SY46 172 aa3.66□□□□□ -1.82
XRN1-207ENST00000468894 SBK1Q52WX2 424 aa3.66□□□□□ -1.82
XRN1-207ENST00000468894 ETFRF1Q6IPR1 90 aa3.66□□□□□ -1.82
XRN1-207ENST00000468894 LEG1Q6P5S2 330 aa3.66□□□□□ -1.82
XRN1-207ENST00000468894 ARFGAP2Q8N6H7 521 aa3.66□□□□□ -1.82
XRN1-207ENST00000468894 WDR36Q8NI36 951 aaKnown RBP3.66□□□□□ -1.82
XRN1-207ENST00000468894 ACAT2Q9BWD1 397 aa3.66□□□□□ -1.82
XRN1-207ENST00000468894 TSSK1BQ9BXA7 367 aa3.66□□□□□ -1.82
XRN1-207ENST00000468894 ELOVL2Q9NXB9 296 aa3.66□□□□□ -1.82
XRN1-207ENST00000468894 DNPEPQ9ULA0 475 aa3.66□□□□□ -1.82
XRN1-207ENST00000468894 CLSPNQ9HAW4 1339 aa3.66□□□□□ -1.82
XRN1-207ENST00000468894 RAD54L2Q9Y4B4 1467 aa3.66□□□□□ -1.82
XRN1-207ENST00000468894 COL16A1Q07092 1604 aaPredicted RBP3.66□□□□□ -1.82
XRN1-207ENST00000468894 FBLL1A6NHQ2 334 aaKnown RBP3.65□□□□□ -1.83
XRN1-207ENST00000468894 IGHV3-23P01764 117 aa3.65□□□□□ -1.83
XRN1-207ENST00000468894 PTMAP06454 111 aaKnown RBP3.65□□□□□ -1.83
XRN1-207ENST00000468894 CAMK4Q16566 473 aa3.65□□□□□ -1.83
XRN1-207ENST00000468894 PARP6Q2NL67 630 aa3.65□□□□□ -1.83
XRN1-207ENST00000468894 SLC10A5Q5PT55 438 aa3.65□□□□□ -1.83
XRN1-207ENST00000468894 MEDAGQ5VYS4 303 aa3.65□□□□□ -1.83
XRN1-207ENST00000468894 ZNF57Q68EA5 555 aaPredicted RBP3.65□□□□□ -1.83
XRN1-207ENST00000468894 SNX32Q86XE0 403 aa3.65□□□□□ -1.83
XRN1-207ENST00000468894 BATF2Q8N1L9 274 aa3.65□□□□□ -1.83
XRN1-207ENST00000468894 ADAMTS16Q8TE57 1224 aa3.65□□□□□ -1.83
XRN1-207ENST00000468894 LINC00167Q96N53 147 aa3.65□□□□□ -1.83
XRN1-207ENST00000468894 TECTBQ96PL2 329 aa3.65□□□□□ -1.83
XRN1-207ENST00000468894 ISG20L2Q9H9L3 353 aaKnown RBP3.65□□□□□ -1.83
XRN1-207ENST00000468894 B4DXG7 233 aa3.64□□□□□ -1.83
XRN1-207ENST00000468894 PGK2P07205 417 aa3.64□□□□□ -1.83
XRN1-207ENST00000468894 PRG2P13727 222 aa3.64□□□□□ -1.83
XRN1-207ENST00000468894 CD1EP15812 388 aa3.64□□□□□ -1.83
XRN1-207ENST00000468894 MGMTP16455 207 aa3.64□□□□□ -1.83
XRN1-207ENST00000468894 AHCYP23526 432 aa3.64□□□□□ -1.83
XRN1-207ENST00000468894 TRPC1P48995 793 aa3.64□□□□□ -1.83
XRN1-207ENST00000468894 EFNA3P52797 238 aa3.64□□□□□ -1.83
XRN1-207ENST00000468894 MYBPC1Q00872 1141 aa3.64□□□□□ -1.83
XRN1-207ENST00000468894 IL9RQ01113 521 aa3.64□□□□□ -1.83
XRN1-207ENST00000468894 UBXN1Q04323 297 aa3.64□□□□□ -1.83
XRN1-207ENST00000468894 SRYQ05066 204 aa3.64□□□□□ -1.83
XRN1-207ENST00000468894 FAM159AQ6UWV7 190 aa3.64□□□□□ -1.83
XRN1-207ENST00000468894 ZNF562Q6V9R5 426 aa3.64□□□□□ -1.83
XRN1-207ENST00000468894 PAQR9Q6ZVX9 377 aa3.64□□□□□ -1.83
XRN1-207ENST00000468894 ZNF713Q8N859 430 aaPredicted RBP3.64□□□□□ -1.83
XRN1-207ENST00000468894 CCNYQ8ND76 341 aa3.64□□□□□ -1.83
XRN1-207ENST00000468894 OR2L5Q8NG80 312 aa3.64□□□□□ -1.83
XRN1-207ENST00000468894 ASB8Q9H765 288 aa3.64□□□□□ -1.83
XRN1-207ENST00000468894 DUS2Q9NX74 493 aaKnown RBP3.64□□□□□ -1.83
XRN1-207ENST00000468894 ADAM22Q9P0K1 906 aa3.64□□□□□ -1.83
XRN1-207ENST00000468894 EXOSC1Q9Y3B2 195 aaKnown RBP3.64□□□□□ -1.83
XRN1-207ENST00000468894 STRAPQ9Y3F4 350 aaKnown RBP3.64□□□□□ -1.83
XRN1-207ENST00000468894 SLC9B1P1A6NJY1 282 aa3.63□□□□□ -1.83
XRN1-207ENST00000468894 TM9SF1O15321 606 aa3.63□□□□□ -1.83
XRN1-207ENST00000468894 PGK1P00558 417 aa3.63□□□□□ -1.83
XRN1-207ENST00000468894 IGFBP1P08833 259 aaPredicted RBP3.63□□□□□ -1.83
XRN1-207ENST00000468894 CCDC166P0CW27 439 aa3.63□□□□□ -1.83
XRN1-207ENST00000468894 AKT2P31751 481 aa3.63□□□□□ -1.83
XRN1-207ENST00000468894 GPC3P51654 580 aa3.63□□□□□ -1.83
XRN1-207ENST00000468894 YBEYP58557 167 aaPredicted RBP3.63□□□□□ -1.83
XRN1-207ENST00000468894 CBX3Q13185 183 aa3.63□□□□□ -1.83
XRN1-207ENST00000468894 CAPRIN1Q14444 709 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms