RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 HEPACAMQ14CZ8 416 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 HERC3Q15034 1050 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 MAPRE2Q15555 327 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 CLPPQ16740 277 aaPredicted RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ISXQ2M1V0 245 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 PRTGQ2VWP7 1150 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ZNF750Q32MQ0 723 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ADPRMQ3LIE5 342 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 FAM174BQ3ZCQ3 159 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 TIGD2Q4W5G0 525 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 C3orf38Q5JPI3 329 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 PAGE3Q5JUK9 113 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 SPANXN4Q5MJ08 99 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 C6orf10Q5SRN2 563 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 NDUFAF5Q5TEU4 345 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ARHGAP40Q5TG30 622 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 GARNL3Q5VVW2 1013 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 REP15Q6BDI9 236 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 FAM71E1Q6IPT2 247 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 PWWP2BQ6NUJ5 590 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 TLDC1Q6P9B6 456 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 FAM199XQ6PEV8 388 aaPredicted RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 SLC2A7Q6PXP3 512 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 C6orf89Q6UWU4 347 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 SHISA6Q6ZSJ9 500 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ZNF621Q6ZSS3 439 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 RHOUQ7L0Q8 258 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 R3HCC1LQ7Z5L2 792 aaKnown RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 PPP1R32Q7Z5V6 425 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 FUNDC1Q8IVP5 155 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 FAM9CQ8IZT9 166 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 CLEC4FQ8N1N0 589 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 CA13Q8N1Q1 262 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 CPEB3Q8NE35 698 aaKnown RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 OR51Q1Q8NH59 317 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 RP9Q8TA86 221 aaKnown RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 PROKR1Q8TCW9 393 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 MR1Q95460 341 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 CIDECQ96AQ7 238 aaPredicted RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 PPCDCQ96CD2 204 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 RCN3Q96D15 328 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 CMTM5Q96DZ9 223 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 SPDL1Q96EA4 605 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 METTL2AQ96IZ6 378 aaKnown RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 C10orf90Q96M02 699 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 OR52E6Q96RD3 313 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 BBS4Q96RK4 519 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 CSF3RQ99062 836 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 CMKLR1Q99788 373 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 SLC25A23Q9BV35 468 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 DUSP26Q9BV47 211 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ZNF717Q9BY31 904 aaPredicted RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 DPH1Q9BZG8 443 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ACTL8Q9H568 366 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ZNF385DQ9H6B1 395 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 REEP4Q9H6H4 257 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 DDX31Q9H8H2 851 aaKnown RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 WDR41Q9HAD4 459 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 EFCAB1Q9HAE3 211 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ZNF304Q9HCX3 659 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 MIEF1Q9NQG6 463 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 SDR39U1Q9NRG7 319 aaPredicted RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 LYARQ9NX58 379 aaKnown RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 TEX10Q9NXF1 929 aaPredicted RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ASIC5Q9NY37 505 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 SEMA5BQ9P283 1151 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 PDP2Q9P2J9 529 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 TRPC4Q9UBN4 977 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 DKK2Q9UBU2 259 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 UTS2RQ9UKP6 389 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 PACSIN3Q9UKS6 424 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 PCDHGB4Q9UN71 923 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 CDC14AQ9UNH5 594 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ASB4Q9Y574 426 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 NOX1Q9Y5S8 564 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 SLC22A7Q9Y694 548 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 GPR179Q6PRD1 2367 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 GOLGA4Q13439 2230 aaKnown RBP3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 ASXL3Q9C0F0 2248 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 RP1P56715 2156 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 SCN3AQ9NY46 2000 aa3.82□□□□□ -1.8
TMEM39A-204ENST00000468545 CCDC187A0A096LP49 1063 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 A0A1W2PP18 115 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 A0A1W2PRB8 838 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 A0A1W2PS29 197 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 C1orf226A1L170 272 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 TMEM200CA6NKL6 621 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 NPIPB8E9PQR5 432 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 M0QYG6 137 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 FBP2O00757 339 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 MRASO14807 208 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 SLC30A4O14863 429 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 DSCR3O14972 297 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 ANKRD28O15084 1053 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 SCAMP2O15127 329 aaKnown RBP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 GYG2O15488 501 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 LDB3O75112 727 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 JRKO75564 520 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 SNRNP200O75643 2136 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms